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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g075470.2.1 Tomato plasma membrane 84.42 85.08
Solyc08g075450.2.1 Tomato plasma membrane 78.96 80.42
Solyc12g096160.1.1 Tomato plasma membrane 73.77 73.96
VIT_02s0087g00880.t01 Wine grape plasma membrane 67.01 68.62
KRH07780 Soybean golgi, plasma membrane, plastid 66.49 65.98
KRH07254 Soybean plasma membrane 65.71 65.37
KRH28983 Soybean plasma membrane 64.94 64.1
CDY09279 Canola plasma membrane 64.68 62.56
CDX86054 Canola plasma membrane 62.34 62.5
Bra038272.1-P Field mustard plasma membrane 60.52 62.47
KRH28984 Soybean plasma membrane 58.44 62.15
CDX99139 Canola plasma membrane 61.82 61.98
KRH28985 Soybean plasma membrane 62.6 61.95
AT3G45870.1 Thale cress plasma membrane 61.3 61.3
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 62.86 60.8
AT4G19185.1 Thale cress plasma membrane 62.6 60.55
CDX76488 Canola plasma membrane 62.34 60.3
CDY13057 Canola plasma membrane 59.74 59.9
AT5G45370.2 Thale cress plasma membrane 59.22 59.84
CDY23125 Canola plasma membrane 59.48 59.64
Bra027604.1-P Field mustard plasma membrane 58.96 59.11
CDY13056 Canola plasma membrane 57.66 57.96
GSMUA_Achr9P23160_001 Banana plasma membrane 54.81 57.81
CDY23124 Canola plasma membrane 57.4 57.7
Bra027605.1-P Field mustard plasma membrane 57.14 57.44
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 61.04 56.9
CDX78925 Canola plasma membrane 56.62 55.61
Zm00001d017765_P002 Maize plasma membrane 56.62 55.47
KXG30925 Sorghum plasma membrane 55.84 54.71
TraesCS6B01G298700.1 Wheat plasma membrane 55.84 54.43
TraesCS6D01G251700.1 Wheat plasma membrane 55.84 54.43
GSMUA_Achr4P12460_001 Banana golgi, plasma membrane, vacuole 53.77 53.91
Os02t0703900-02 Rice cytosol, golgi, plasma membrane 55.06 53.54
HORVU6Hr1G068730.1 Barley golgi, mitochondrion, plasma membrane 49.09 52.79
GSMUA_Achr3P27710_001 Banana plasma membrane 53.51 50.86
KXG30926 Sorghum plasma membrane 42.6 50.77
TraesCS7D01G403100.2 Wheat plasma membrane 52.47 50.63
TraesCS7A01G409900.1 Wheat plasma membrane 52.21 50.38
TraesCS7B01G309300.1 Wheat plasma membrane 51.95 50.13
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 49.09 49.22
TraesCS6A01G271500.1 Wheat plasma membrane 55.58 49.08
Os06t0708700-01 Rice plasma membrane 52.21 48.67
Zm00001d036440_P003 Maize plasma membrane 51.17 47.93
HORVU6Hr1G050960.1 Barley golgi, plasma membrane 29.87 47.92
EER92186 Sorghum cytosol, golgi, peroxisome 48.31 47.69
CDX99393 Canola mitochondrion 61.04 47.19
KXG20824 Sorghum cytosol, golgi, peroxisome 51.69 47.04
Zm00001d047208_P001 Maize plasma membrane 47.01 46.65
Zm00001d029383_P001 Maize plastid 41.04 43.77
HORVU7Hr1G095750.9 Barley cytosol, peroxisome 44.42 41.91
Solyc03g118900.1.1 Tomato plasma membrane 30.65 32.87
Solyc04g080940.2.1 Tomato extracellular, plasma membrane 31.69 31.69
Solyc06g031710.2.1 Tomato plasma membrane 27.53 29.12
Solyc10g078270.1.1 Tomato golgi, plasma membrane, plastid 28.31 28.46
Solyc09g010360.2.1 Tomato golgi, plasma membrane, vacuole 27.27 28.0
Solyc09g089860.2.1 Tomato plasma membrane 26.49 27.95
Solyc04g012070.1.1 Tomato plasma membrane 25.45 27.76
Solyc10g080980.1.1 Tomato golgi, plasma membrane, vacuole 26.49 26.63
Solyc10g080990.1.1 Tomato golgi, plasma membrane, plastid 27.01 26.46
Solyc12g098280.1.1 Tomato extracellular, golgi 19.22 26.24
Solyc11g012930.1.1 Tomato golgi, plasma membrane 24.68 25.75
Solyc04g011340.2.1 Tomato plasma membrane 24.68 25.27
Solyc03g005480.2.1 Tomato plasma membrane 22.86 24.18
Protein Annotations
MapMan:24.2.1.5InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:K4CMR3PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF75SUPFAM:SSF103481
EnsemblPlantsGene:Solyc08g075460.2EnsemblPlants:Solyc08g075460.2.1TMHMM:TMhelixUniParc:UPI000276B6E7InterPro:WAT1-relatedSEG:seg
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4CMR3]
Coordinates
chr8:+:59611331..59617563
Molecular Weight (calculated)
41218.7 Da
IEP (calculated)
6.342
GRAVY (calculated)
0.604
Length
385 amino acids
Sequence
(BLAST)
001: MEAVEDGNGG EIWKAHGAMV LVQLFNGGYH VITKVALNVG MNEIVFCLYR DLIAIAILAP IAYFREKRSR LPLSKRLLLS FFILGLTGIF GNQLLFLLGL
101: GYTNPAYAAA LQPAIPVFTF ILSVLMGTET AKLLTMEGQA KVGGTVVCVS GAILMAVFRG TAVFGDGTSD FTAQIEISAK GQPEPAGWLM SSLLELGFDN
201: WHLGVLCLIG NCMCMAAYIA FQAPVLREYP ASLTLTAYSY LFGVIPMIGT SFLVTNGSTD WYLTQSEVGA VCYAGIITSA LNYGLTTWCN KVIGPALVSL
301: YNPLQPAATA ILSSIFLGSA IYLGSILGGL LIIAGLYFVT WASYREKQAA MGTITHDPRI TDPLIPYQIG HNSSVPSSSM PKISD
Best Arabidopsis Sequence Match ( AT4G19185.1 )
(BLAST)
001: MTAPMILTGS GSAAERDARM AHTAMAFVQL FNGGYHVITK VALNVGVNQL VFCVCRDLLA LSILAPLAYF RERKIRTPMN KSLLLSFFFL GLAGVFGNQL
101: LFLIGLTYTN PTYAAAIQPS IPVFTFLLAV MMGTERVNLL RIEGQTKVGG TLVCVMGAVF MVVFRGPALL GDKDADFAMN NEISAKGQPE PTGWLVSGFL
201: DLGFEQWHIG VLCLIGNCMC MATFLAIQAP LLKKYPANLS VAALSYFFGT VLMCTTAFFM VKEPLDWKLT QSEVLAVIYA GVIASALNYG LLTWSNKIIG
301: PALVALYNPL QPAASAFLSR IFLGSPIYLG SVVGGFFIIL GLYMVTWASF RERKTAVSGI GIAPHGLKTS EPLIFNGTVN RLGQLFSGLP SSSVKSAD
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178UVH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.