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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G095750.9 Barley cytosol, peroxisome 100.0 58.82
TraesCS7A01G409900.1 Wheat plasma membrane 94.58 56.89
TraesCS7D01G403100.2 Wheat plasma membrane 93.75 56.39
TraesCS7B01G309300.1 Wheat plasma membrane 92.92 55.89
Os06t0708700-01 Rice plasma membrane 83.33 48.43
KXG20824 Sorghum cytosol, golgi, peroxisome 79.58 45.15
Zm00001d036440_P003 Maize plasma membrane 72.92 42.58
GSMUA_Achr9P23160_001 Banana plasma membrane 55.0 36.16
GSMUA_Achr4P12460_001 Banana golgi, plasma membrane, vacuole 57.5 35.94
VIT_02s0087g00880.t01 Wine grape plasma membrane 54.17 34.57
Bra038272.1-P Field mustard plasma membrane 51.67 33.24
Solyc08g075450.2.1 Tomato plasma membrane 52.08 33.07
GSMUA_Achr3P27710_001 Banana plasma membrane 55.42 32.84
CDX86054 Canola plasma membrane 51.67 32.29
CDX99139 Canola plasma membrane 51.67 32.29
Solyc08g075470.2.1 Tomato plasma membrane 50.83 31.94
PGSC0003DMT400004947 Potato plasma membrane 50.83 31.94
AT3G45870.1 Thale cress plasma membrane 50.83 31.69
PGSC0003DMT400075315 Potato plasma membrane 49.17 30.73
Solyc12g096160.1.1 Tomato plasma membrane 49.17 30.73
KRH07254 Soybean plasma membrane 49.17 30.49
KRH07780 Soybean golgi, plasma membrane, plastid 49.17 30.41
KRH28985 Soybean plasma membrane 48.75 30.08
Solyc08g075460.2.1 Tomato plasma membrane 47.92 29.87
KRH28984 Soybean plasma membrane 45.0 29.83
KRH28983 Soybean plasma membrane 48.33 29.74
CDY09279 Canola plasma membrane 48.75 29.4
Bra027604.1-P Field mustard plasma membrane 45.83 28.65
AT4G19185.1 Thale cress plasma membrane 47.5 28.64
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 47.5 28.64
CDX78925 Canola plasma membrane 46.67 28.57
Bra027605.1-P Field mustard plasma membrane 45.42 28.46
CDX76488 Canola plasma membrane 47.08 28.39
CDY23125 Canola plasma membrane 45.42 28.39
CDY13056 Canola plasma membrane 45.0 28.2
CDY13057 Canola plasma membrane 45.0 28.12
AT5G45370.2 Thale cress plasma membrane 44.58 28.08
CDY23124 Canola plasma membrane 44.17 27.68
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 46.67 27.12
HORVU6Hr1G068730.1 Barley golgi, mitochondrion, plasma membrane 38.75 25.98
CDX99393 Canola mitochondrion 46.25 22.29
HORVU6Hr1G080220.1 Barley golgi, plasma membrane 25.42 15.72
HORVU6Hr1G080260.1 Barley plasma membrane 24.17 15.06
HORVU6Hr1G080150.1 Barley plasma membrane 24.58 14.9
HORVU7Hr1G109820.1 Barley golgi, plasma membrane 22.5 14.79
HORVU0Hr1G023720.1 Barley plasma membrane 23.75 14.65
HORVU1Hr1G068120.1 Barley plasma membrane 23.75 14.65
HORVU3Hr1G002710.4 Barley plasma membrane 24.58 14.6
HORVU6Hr1G080270.3 Barley plasma membrane 23.33 14.11
HORVU3Hr1G001040.3 Barley golgi, peroxisome 22.5 12.83
HORVU4Hr1G080190.6 Barley peroxisome, plasma membrane 22.08 12.53
HORVU1Hr1G063340.4 Barley peroxisome 14.58 9.64
HORVU3Hr1G078710.1 Barley golgi, plasma membrane 14.17 9.02
HORVU5Hr1G044210.1 Barley golgi 14.17 8.99
HORVU7Hr1G035430.6 Barley golgi 15.0 8.24
Protein Annotations
EnsemblPlants:HORVU6Hr1G050960.1EnsemblPlantsGene:HORVU6Hr1G050960GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF55PFAM:PF00892SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI000B487458UniProt:A0A287U589MapMan:24.2.1.5::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287U589]
Coordinates
chrchr6H:-:309819798..309821763
Molecular Weight (calculated)
25434.2 Da
IEP (calculated)
4.400
GRAVY (calculated)
0.715
Length
240 amino acids
Sequence
(BLAST)
001: GTAVCVFGAV LMVFYRGPSL IGLGGANAAD GNALADASWS GSSYPAQWLT PAMLQFDLGT WNLGVLCLLG NCFLMGAYLV IQAPVLVKYP ASLSLTAYSY
101: SFATIFMVLT GVFATNGLHE WALTGTEMIA ILYAGVVASC LNYAIMTWAN KILGPSLVAL YNPLQPACST ILSTMFLGTP IYLGSLIGGV FIIAGLYLVT
201: WARYNEAQRI LMSGYLNPLL VEVEDAPAPK TQQSSSSIDP
Best Arabidopsis Sequence Match ( AT3G45870.1 )
(BLAST)
001: MESTVEREAW KAHVAMIGVQ LFNGGYHVIT KVALNVGVNQ LVFCVFRDLI ALSILAPLAY IRDKRTRPPL NRQFLLAFFF LGLTGIFGNQ LLFLIGLNYT
101: NPTYAAAIQP SIPVFTFILA LIMGTERLNL FKLEGQAKVG GTLICVAGAV LMVLFRGLAL FGETEAESLG HGESRHTETS GHFMSGFFNG LGRWNLGVLC
201: LIGNCTCMAA FLAIQAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGSIL GGCAIIAGLY SVTWASYKEK KAAAAMAVIP ITSKEAEPLI YKDHKNKPIG HLFTKSPISS PKSDD
Arabidopsis Description
WAT1-related protein At3g45870 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP32]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.