Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 83.92 | 92.69 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 80.85 | 91.69 |
| Os03t0149300-01 | Rice | plasma membrane | 68.79 | 77.81 |
| EER92847 | Sorghum | plasma membrane | 66.19 | 75.07 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 54.14 | 70.03 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 65.96 | 66.75 |
| TraesCS4B01G316400.2 | Wheat | plastid | 61.7 | 63.2 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 48.23 | 60.71 |
| KRG92304 | Soybean | plasma membrane | 29.31 | 58.49 |
| KRH34496 | Soybean | plasma membrane | 47.75 | 57.06 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 48.94 | 56.1 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 47.28 | 54.35 |
| PGSC0003DMT400033974 | Potato | plasma membrane | 31.44 | 53.2 |
| Solyc09g089860.2.1 | Tomato | plasma membrane | 45.86 | 53.15 |
| PGSC0003DMT400015540 | Potato | plasma membrane | 37.35 | 53.02 |
| Solyc04g012070.1.1 | Tomato | plasma membrane | 44.21 | 52.97 |
| PGSC0003DMT400034864 | Potato | plasma membrane | 45.15 | 52.47 |
| Solyc03g005480.2.1 | Tomato | plasma membrane | 44.68 | 51.92 |
| VIT_07s0005g03080.t01 | Wine grape | plasma membrane | 44.68 | 51.92 |
| PGSC0003DMT400044387 | Potato | plasma membrane | 44.68 | 51.78 |
| KRH34491 | Soybean | plasma membrane | 34.99 | 51.21 |
| KRH34492 | Soybean | plasma membrane | 35.46 | 50.68 |
| PGSC0003DMT400034863 | Potato | plasma membrane | 43.03 | 50.0 |
| KRH19541 | Soybean | plasma membrane | 41.84 | 47.84 |
| KRH32169 | Soybean | plasma membrane | 24.59 | 47.06 |
| PGSC0003DMT400071278 | Potato | plasma membrane | 37.35 | 46.06 |
| HORVU6Hr1G080260.1 | Barley | plasma membrane | 30.97 | 34.03 |
| HORVU0Hr1G023720.1 | Barley | plasma membrane | 31.21 | 33.93 |
| HORVU1Hr1G068120.1 | Barley | plasma membrane | 30.97 | 33.68 |
| HORVU7Hr1G109820.1 | Barley | golgi, plasma membrane | 28.37 | 32.88 |
| HORVU6Hr1G080150.1 | Barley | plasma membrane | 30.73 | 32.83 |
| HORVU6Hr1G080220.1 | Barley | golgi, plasma membrane | 30.02 | 32.73 |
| HORVU6Hr1G080270.3 | Barley | plasma membrane | 29.31 | 31.23 |
| HORVU1Hr1G063340.4 | Barley | peroxisome | 26.0 | 30.3 |
| HORVU3Hr1G002710.4 | Barley | plasma membrane | 28.61 | 29.95 |
| HORVU3Hr1G078710.1 | Barley | golgi, plasma membrane | 25.06 | 28.12 |
| HORVU5Hr1G044210.1 | Barley | golgi | 24.11 | 26.98 |
| HORVU6Hr1G068730.1 | Barley | golgi, mitochondrion, plasma membrane | 19.62 | 23.18 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 22.7 | 22.8 |
| HORVU7Hr1G035430.6 | Barley | golgi | 23.17 | 22.43 |
| HORVU6Hr1G050960.1 | Barley | golgi, plasma membrane | 12.53 | 22.08 |
| HORVU7Hr1G095750.9 | Barley | cytosol, peroxisome | 18.44 | 19.12 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G080190.6 | EnsemblPlantsGene:HORVU4Hr1G080190 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF46 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI000B47D8AD | UniProt:A0A287PTT8 | MapMan:24.2.1.5 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:614488798..614490709
Molecular Weight (calculated)
46346.1 Da
IEP (calculated)
8.393
GRAVY (calculated)
0.429
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: WIDSEPPSAC QIPRATAACC CSGGAVIQIC SVLVEGKLIK LGMAAAEMGL GGLWRRYAPH NMMIMVQLCY TLMYFVTEAA FNRGLNPYVY VTYRHLLVAV
101: LLWPFAYYHE KKLRPKMTWM LFLEIFVLSL LGVSLTLNMY FASLKYTSPT FVTSMVNTVA SITFVIAIAL RIEIVDLRSA RGLAKVAGTA VSFAGVTTMT
201: LYKGAAIASP WKAPVHIPGG GDAAHDGWLK GSLLAVASCV CWSVWYIMQA TSVKRYPAEL SLTAWMATVG GVQSVAFTVL LQHEKQDWLI GFGLKFWCIV
301: YSGIACSGFT VFAQLWCTEK KGPVFVTMFN PVSTIMVAIL AYFIFGENLY VGSIIGGVVV ILGLYMLLWG KDKDQEYKAG AASGEEQAGS PDLDCEKQQR
401: QEEKMVGVSS ARGGSEQETR TTR
101: LLWPFAYYHE KKLRPKMTWM LFLEIFVLSL LGVSLTLNMY FASLKYTSPT FVTSMVNTVA SITFVIAIAL RIEIVDLRSA RGLAKVAGTA VSFAGVTTMT
201: LYKGAAIASP WKAPVHIPGG GDAAHDGWLK GSLLAVASCV CWSVWYIMQA TSVKRYPAEL SLTAWMATVG GVQSVAFTVL LQHEKQDWLI GFGLKFWCIV
301: YSGIACSGFT VFAQLWCTEK KGPVFVTMFN PVSTIMVAIL AYFIFGENLY VGSIIGGVVV ILGLYMLLWG KDKDQEYKAG AASGEEQAGS PDLDCEKQQR
401: QEEKMVGVSS ARGGSEQETR TTR
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.