Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 4
- plasma membrane 6
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400033974 | Potato | plasma membrane | 76.85 | 91.6 |
| PGSC0003DMT400044387 | Potato | plasma membrane | 93.62 | 76.44 |
| PGSC0003DMT400034864 | Potato | plasma membrane | 78.52 | 64.29 |
| PGSC0003DMT400034863 | Potato | plasma membrane | 74.83 | 61.26 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 69.46 | 56.25 |
| KRH34491 | Soybean | plasma membrane | 53.69 | 55.36 |
| KRH34496 | Soybean | plasma membrane | 65.44 | 55.08 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 59.73 | 52.98 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 63.09 | 50.95 |
| PGSC0003DMT400071278 | Potato | plasma membrane | 57.38 | 49.85 |
| KRG92304 | Soybean | plasma membrane | 32.21 | 45.28 |
| KRH34492 | Soybean | plasma membrane | 44.97 | 45.27 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 48.99 | 44.65 |
| Os03t0149300-01 | Rice | plasma membrane | 54.7 | 43.58 |
| EER92847 | Sorghum | plasma membrane | 54.36 | 43.43 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 53.36 | 42.63 |
| Zm00001d029545_P001 | Maize | plasma membrane | 51.01 | 40.75 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 52.35 | 40.73 |
| EER94681 | Sorghum | plasma membrane | 51.68 | 40.0 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 54.03 | 38.52 |
| HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 53.02 | 37.35 |
| PGSC0003DMT400076318 | Potato | plasma membrane | 38.59 | 31.42 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 38.59 | 30.1 |
| PGSC0003DMT400014719 | Potato | plasma membrane | 35.23 | 29.25 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 34.9 | 28.26 |
| TraesCS4B01G316400.2 | Wheat | plastid | 38.93 | 28.09 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 35.23 | 28.0 |
| PGSC0003DMT400071320 | Potato | plasma membrane | 34.9 | 27.59 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 35.57 | 27.53 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 19.46 | 26.85 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 33.89 | 25.57 |
| PGSC0003DMT400004947 | Potato | plasma membrane | 27.52 | 21.47 |
| PGSC0003DMT400075315 | Potato | plasma membrane | 27.52 | 21.35 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015540 | EnsemblPlantsGene:PGSC0003DMG400006066 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF46 | PFAM:PF00892 | PGSC:PGSC0003DMG400006066 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000295552E | UniProt:M1A663 | MapMan:24.2.1.5 | : |
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400006066]
Coordinates
chr11:+:7941159..7942719
Molecular Weight (calculated)
32969.0 Da
IEP (calculated)
9.604
GRAVY (calculated)
0.555
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSIGTYKR KTRPKLTIAL LLEIFVLSLV GVSLTLNMYF VSLNYTSPTL LASMVNTIAA LTFVLAVILR LEDANIRNPR GIAKVVGTLV SLAGVMSMTL
101: YKGPVVKSLG HPLIYIHRGN GVVHENWSKG LILTAASCIT WSIWYIMQAY TLKRYPAQLS LTTWMSFVGA AQSAFYTVIV QHKRAAWTMG FNIDFWSTLY
201: GGIVMSGLVV YIQLWCTEQK GPVFITVFNP LSTVLVAVLA YFVLGEKLYT GSIIGAVIVI IGLYLLLWGK EDPQPEMKNE DPMMQIFTSD ADKFSAEP
101: YKGPVVKSLG HPLIYIHRGN GVVHENWSKG LILTAASCIT WSIWYIMQAY TLKRYPAQLS LTTWMSFVGA AQSAFYTVIV QHKRAAWTMG FNIDFWSTLY
201: GGIVMSGLVV YIQLWCTEQK GPVFITVFNP LSTVLVAVLA YFVLGEKLYT GSIIGAVIVI IGLYLLLWGK EDPQPEMKNE DPMMQIFTSD ADKFSAEP
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.