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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400015540 Potato plasma membrane 91.6 76.85
Solyc04g012070.1.1 Tomato plasma membrane 87.6 62.04
PGSC0003DMT400044387 Potato plasma membrane 88.4 60.55
PGSC0003DMT400034864 Potato plasma membrane 77.6 53.3
PGSC0003DMT400034863 Potato plasma membrane 74.4 51.1
KRH34491 Soybean plasma membrane 56.4 48.79
VIT_05s0049g00450.t01 Wine grape mitochondrion, plasma membrane 70.8 48.1
KRH34496 Soybean plasma membrane 67.2 47.46
GSMUA_Achr11P... Banana plasma membrane, vacuole 60.4 44.94
GSMUA_Achr8P14310_001 Banana plasma membrane 64.8 43.9
PGSC0003DMT400071278 Potato plasma membrane 54.8 39.94
KXG40121 Sorghum golgi, plasma membrane, vacuole 50.4 38.53
KRH34492 Soybean plasma membrane 45.6 38.51
EER92847 Sorghum plasma membrane 55.6 37.27
Os03t0149300-01 Rice plasma membrane 55.6 37.17
TraesCS4A01G415600.1 Wheat plasma membrane 53.6 35.92
Zm00001d029545_P001 Maize plasma membrane 51.6 34.58
TraesCS4D01G313000.1 Wheat mitochondrion, plasma membrane 52.8 34.46
KRG92304 Soybean plasma membrane 29.2 34.43
EER94681 Sorghum plasma membrane 52.8 34.29
Zm00001d027682_P001 Maize golgi, plasma membrane 54.4 32.54
HORVU4Hr1G080190.6 Barley peroxisome, plasma membrane 53.2 31.44
PGSC0003DMT400076318 Potato plasma membrane 38.8 26.5
PGSC0003DMT400014719 Potato plasma membrane 36.8 25.63
PGSC0003DMT400018488 Potato golgi, plasma membrane, plastid 38.8 25.39
PGSC0003DMT400002407 Potato golgi, plasma membrane 36.8 25.0
PGSC0003DMT400022827 Potato golgi, plasma membrane, vacuole 36.4 24.27
PGSC0003DMT400071320 Potato plasma membrane 36.0 23.87
PGSC0003DMT400009630 Potato plasma membrane 37.2 23.54
PGSC0003DMT400072217 Potato plasma membrane 36.0 23.38
TraesCS4B01G316400.2 Wheat plastid 35.6 21.55
PGSC0003DMT400095497 Potato plasma membrane 18.4 21.3
PGSC0003DMT400004947 Potato plasma membrane 28.8 18.85
PGSC0003DMT400075315 Potato plasma membrane 27.6 17.97
Protein Annotations
EnsemblPlants:PGSC0003DMT400033974EnsemblPlantsGene:PGSC0003DMG400013063GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF46PFAM:PF00892PGSC:PGSC0003DMG400013063SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000296D2B4UniProt:M1AZZ7MapMan:24.2.1.5:
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400013063]
Coordinates
chr9:-:13526066..13526818
Molecular Weight (calculated)
27946.8 Da
IEP (calculated)
9.635
GRAVY (calculated)
0.575
Length
250 amino acids
Sequence
(BLAST)
001: MYFASLSYTS PTLLASMVNT IAALSFVLAV ILRLEDAYIR NPRGIAKVLG TLVSLAGVMS MTLYKGPVVK SLGHPLIYIH RGNGVVHENW SKGMILTAVS
101: CITWSIWYIM QAYTLKRYPT QLSLTTWMSF VGAAQSAFYT VIVQHKRTAW TMGFNIDFWS TLYGGIVMSG LVVYIQLWCI EQKGPVFVTM FNPLSTVLVA
201: VLAYFVLGEK LYTGSIIGAV IIIIGLYLLL WGKEDPQPEL KERERAMLHN
Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.