Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400015540 | Potato | plasma membrane | 91.6 | 76.85 |
Solyc04g012070.1.1 | Tomato | plasma membrane | 87.6 | 62.04 |
PGSC0003DMT400044387 | Potato | plasma membrane | 88.4 | 60.55 |
PGSC0003DMT400034864 | Potato | plasma membrane | 77.6 | 53.3 |
PGSC0003DMT400034863 | Potato | plasma membrane | 74.4 | 51.1 |
KRH34491 | Soybean | plasma membrane | 56.4 | 48.79 |
VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 70.8 | 48.1 |
KRH34496 | Soybean | plasma membrane | 67.2 | 47.46 |
GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 60.4 | 44.94 |
GSMUA_Achr8P14310_001 | Banana | plasma membrane | 64.8 | 43.9 |
PGSC0003DMT400071278 | Potato | plasma membrane | 54.8 | 39.94 |
KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 50.4 | 38.53 |
KRH34492 | Soybean | plasma membrane | 45.6 | 38.51 |
EER92847 | Sorghum | plasma membrane | 55.6 | 37.27 |
Os03t0149300-01 | Rice | plasma membrane | 55.6 | 37.17 |
TraesCS4A01G415600.1 | Wheat | plasma membrane | 53.6 | 35.92 |
Zm00001d029545_P001 | Maize | plasma membrane | 51.6 | 34.58 |
TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 52.8 | 34.46 |
KRG92304 | Soybean | plasma membrane | 29.2 | 34.43 |
EER94681 | Sorghum | plasma membrane | 52.8 | 34.29 |
Zm00001d027682_P001 | Maize | golgi, plasma membrane | 54.4 | 32.54 |
HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 53.2 | 31.44 |
PGSC0003DMT400076318 | Potato | plasma membrane | 38.8 | 26.5 |
PGSC0003DMT400014719 | Potato | plasma membrane | 36.8 | 25.63 |
PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 38.8 | 25.39 |
PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 36.8 | 25.0 |
PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 36.4 | 24.27 |
PGSC0003DMT400071320 | Potato | plasma membrane | 36.0 | 23.87 |
PGSC0003DMT400009630 | Potato | plasma membrane | 37.2 | 23.54 |
PGSC0003DMT400072217 | Potato | plasma membrane | 36.0 | 23.38 |
TraesCS4B01G316400.2 | Wheat | plastid | 35.6 | 21.55 |
PGSC0003DMT400095497 | Potato | plasma membrane | 18.4 | 21.3 |
PGSC0003DMT400004947 | Potato | plasma membrane | 28.8 | 18.85 |
PGSC0003DMT400075315 | Potato | plasma membrane | 27.6 | 17.97 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400033974 | EnsemblPlantsGene:PGSC0003DMG400013063 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF46 | PFAM:PF00892 | PGSC:PGSC0003DMG400013063 | SEG:seg |
SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000296D2B4 | UniProt:M1AZZ7 | MapMan:24.2.1.5 | : |
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400013063]
Coordinates
chr9:-:13526066..13526818
Molecular Weight (calculated)
27946.8 Da
IEP (calculated)
9.635
GRAVY (calculated)
0.575
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFASLSYTS PTLLASMVNT IAALSFVLAV ILRLEDAYIR NPRGIAKVLG TLVSLAGVMS MTLYKGPVVK SLGHPLIYIH RGNGVVHENW SKGMILTAVS
101: CITWSIWYIM QAYTLKRYPT QLSLTTWMSF VGAAQSAFYT VIVQHKRTAW TMGFNIDFWS TLYGGIVMSG LVVYIQLWCI EQKGPVFVTM FNPLSTVLVA
201: VLAYFVLGEK LYTGSIIGAV IIIIGLYLLL WGKEDPQPEL KERERAMLHN
101: CITWSIWYIM QAYTLKRYPT QLSLTTWMSF VGAAQSAFYT VIVQHKRTAW TMGFNIDFWS TLYGGIVMSG LVVYIQLWCI EQKGPVFVTM FNPLSTVLVA
201: VLAYFVLGEK LYTGSIIGAV IIIIGLYLLL WGKEDPQPEL KERERAMLHN
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.