Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005480.2.1 | Tomato | plasma membrane | 94.51 | 94.51 |
| PGSC0003DMT400034863 | Potato | plasma membrane | 93.68 | 93.68 |
| PGSC0003DMT400071278 | Potato | plasma membrane | 79.67 | 84.55 |
| PGSC0003DMT400015540 | Potato | plasma membrane | 64.29 | 78.52 |
| PGSC0003DMT400033974 | Potato | plasma membrane | 53.3 | 77.6 |
| PGSC0003DMT400044387 | Potato | plasma membrane | 77.75 | 77.53 |
| KRH34496 | Soybean | plasma membrane | 64.84 | 66.67 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 67.03 | 66.3 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 58.52 | 63.39 |
| KRH34491 | Soybean | plasma membrane | 49.73 | 62.63 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 63.46 | 62.6 |
| KRG92304 | Soybean | plasma membrane | 35.99 | 61.79 |
| KRH34492 | Soybean | plasma membrane | 48.35 | 59.46 |
| EER92847 | Sorghum | plasma membrane | 55.49 | 54.16 |
| Os03t0149300-01 | Rice | plasma membrane | 54.67 | 53.21 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 47.25 | 52.6 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 53.3 | 52.01 |
| Zm00001d029545_P001 | Maize | plasma membrane | 51.37 | 50.13 |
| EER94681 | Sorghum | plasma membrane | 52.47 | 49.61 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 52.2 | 49.61 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 54.12 | 47.13 |
| HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 52.47 | 45.15 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 38.74 | 36.91 |
| TraesCS4B01G316400.2 | Wheat | plastid | 39.84 | 35.11 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 37.09 | 35.06 |
| PGSC0003DMT400076318 | Potato | plasma membrane | 34.89 | 34.7 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 35.16 | 34.13 |
| PGSC0003DMT400014719 | Potato | plasma membrane | 32.97 | 33.43 |
| PGSC0003DMT400071320 | Potato | plasma membrane | 34.34 | 33.16 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 33.24 | 32.88 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 34.07 | 31.39 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 17.31 | 29.17 |
| PGSC0003DMT400004947 | Potato | plasma membrane | 25.82 | 24.61 |
| PGSC0003DMT400075315 | Potato | plasma membrane | 25.82 | 24.48 |
Protein Annotations
| EntrezGene:102588716 | MapMan:24.2.1.5 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| UniProt:M1B1F1 | PFAM:PF00892 | EnsemblPlantsGene:PGSC0003DMG401013400 | PGSC:PGSC0003DMG401013400 | EnsemblPlants:PGSC0003DMT400034864 | PANTHER:PTHR31218 |
| PANTHER:PTHR31218:SF46 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000295B293 | InterPro:WAT1-related | RefSeq:XP_006356107.1 |
| SEG:seg | : | : | : | : | : |
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG401013400]
Coordinates
chr3:+:563283..567792
Molecular Weight (calculated)
41323.7 Da
IEP (calculated)
9.477
GRAVY (calculated)
0.480
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKFKPLL LMILVQICYT FLYFITEASF SHGMNPHVYV TYRNIVGGLV MLPFAYFLER KKRPKLTMAL LLEFFVLSLM GVSLTLNMYF VSLTFTSPTF
101: IASMLNTIAA LTFVLAVILR LEIVNVEDPR GIAKIIGTLV SLAGVMIMTL YKGAILKNLW HPIIYIHQGN NVVKEDWVKG SILTVASCIT WAIWYIMQAY
201: TLKRYPAQLS LTTWMSFVGA AQSAFYTVIV QHKRAAWTIG FNIDFWSTIY GGIVISGLVG YIQLWCTEQK GPVFVTMFNP LSTILVALLA YFVFGEKLYM
301: GSIIGAIVVI VGLYLLLWGK EDPKSERKDE EKCCTTKKEL YHEDNMMQKF TSDANPKDTK KPKQ
101: IASMLNTIAA LTFVLAVILR LEIVNVEDPR GIAKIIGTLV SLAGVMIMTL YKGAILKNLW HPIIYIHQGN NVVKEDWVKG SILTVASCIT WAIWYIMQAY
201: TLKRYPAQLS LTTWMSFVGA AQSAFYTVIV QHKRAAWTIG FNIDFWSTIY GGIVISGLVG YIQLWCTEQK GPVFVTMFNP LSTILVALLA YFVFGEKLYM
301: GSIIGAIVVI VGLYLLLWGK EDPKSERKDE EKCCTTKKEL YHEDNMMQKF TSDANPKDTK KPKQ
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.