Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 8
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034864 | Potato | plasma membrane | 84.55 | 79.67 |
| PGSC0003DMT400034863 | Potato | plasma membrane | 82.22 | 77.47 |
| Solyc03g005480.2.1 | Tomato | plasma membrane | 80.47 | 75.82 |
| PGSC0003DMT400044387 | Potato | plasma membrane | 64.43 | 60.55 |
| KRG92304 | Soybean | plasma membrane | 36.44 | 58.96 |
| PGSC0003DMT400015540 | Potato | plasma membrane | 49.85 | 57.38 |
| PGSC0003DMT400033974 | Potato | plasma membrane | 39.94 | 54.8 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 56.27 | 52.45 |
| KRH34496 | Soybean | plasma membrane | 53.94 | 52.26 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 48.98 | 50.0 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 53.64 | 49.86 |
| KRH34491 | Soybean | plasma membrane | 38.19 | 45.33 |
| EER92847 | Sorghum | plasma membrane | 49.27 | 45.31 |
| KRH34492 | Soybean | plasma membrane | 39.07 | 45.27 |
| Os03t0149300-01 | Rice | plasma membrane | 47.52 | 43.58 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 46.65 | 42.9 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 40.52 | 42.51 |
| Zm00001d029545_P001 | Maize | plasma membrane | 45.77 | 42.09 |
| EER94681 | Sorghum | plasma membrane | 47.23 | 42.08 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 45.77 | 40.99 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 48.1 | 39.47 |
| HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 46.06 | 37.35 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 35.57 | 31.94 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 34.4 | 30.65 |
| PGSC0003DMT400076318 | Potato | plasma membrane | 31.78 | 29.78 |
| TraesCS4B01G316400.2 | Wheat | plastid | 34.69 | 28.81 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 30.61 | 28.53 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 30.9 | 28.27 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 17.49 | 27.78 |
| PGSC0003DMT400071320 | Potato | plasma membrane | 30.32 | 27.59 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 30.61 | 26.58 |
| PGSC0003DMT400014719 | Potato | plasma membrane | 27.7 | 26.46 |
| PGSC0003DMT400075315 | Potato | plasma membrane | 24.49 | 21.88 |
| PGSC0003DMT400004947 | Potato | plasma membrane | 23.32 | 20.94 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400071278 | EnsemblPlantsGene:PGSC0003DMG400027717 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF46 | PFAM:PF00892 | PGSC:PGSC0003DMG400027717 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002954A9D | UniProt:M1CNG4 | MapMan:24.2.1.5 | : |
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400027717]
Coordinates
chr3:-:35493107..35498230
Molecular Weight (calculated)
38990.9 Da
IEP (calculated)
9.223
GRAVY (calculated)
0.396
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKFKPHL LMILVQICYT FLYFITEASF SHGMNPHVYV TYRNIVGGLV ILPFAYVLER KKRPKLTMAL LLEFFVLSLM GVSFLNMYFV SLTFTSPTFI
101: ASMLNTIAAL TFVLAVILRL EIVNVEDPRG IAKIIGTLVS LAGVMIMTLY KGAILKNLWH PIIYIHQGNN VVKEDWVKGS ILTIASCITR AIWYIMQVGS
201: TRVRLCPVLG RDRLTFFELE DNLRVQLNQV GLHTEKISST IVTDNMEQKG PVFVTMFNPL STILVALLAY FVFGEKLYMG SIIGAIIVIV GLYLLLWGKE
301: DPKSERKDEE KCCTIKKELH HEDNMMQKFT SDANPMDTKK PKQ
101: ASMLNTIAAL TFVLAVILRL EIVNVEDPRG IAKIIGTLVS LAGVMIMTLY KGAILKNLWH PIIYIHQGNN VVKEDWVKGS ILTIASCITR AIWYIMQVGS
201: TRVRLCPVLG RDRLTFFELE DNLRVQLNQV GLHTEKISST IVTDNMEQKG PVFVTMFNPL STILVALLAY FVFGEKLYMG SIIGAIIVIV GLYLLLWGKE
301: DPKSERKDEE KCCTIKKELH HEDNMMQKFT SDANPMDTKK PKQ
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.