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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane
Any Predictor:golgi, mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G251700.1 Wheat plasma membrane 89.66 81.27
TraesCS6B01G298700.1 Wheat plasma membrane 88.83 80.51
TraesCS6A01G271500.1 Wheat plasma membrane 92.46 75.92
Zm00001d017765_P002 Maize plasma membrane 72.91 66.41
KXG30926 Sorghum plasma membrane 59.5 65.94
Os02t0703900-02 Rice cytosol, golgi, plasma membrane 72.35 65.4
Bra038272.1-P Field mustard plasma membrane 55.31 53.08
CDX86054 Canola plasma membrane 56.7 52.86
CDX99139 Canola plasma membrane 56.42 52.6
VIT_02s0087g00880.t01 Wine grape plasma membrane 55.03 52.39
PGSC0003DMT400075315 Potato plasma membrane 55.87 52.08
Solyc12g096160.1.1 Tomato plasma membrane 55.87 52.08
KRH07780 Soybean golgi, plasma membrane, plastid 56.42 52.06
AT3G45870.1 Thale cress plasma membrane 55.87 51.95
KRH07254 Soybean plasma membrane 56.15 51.94
Solyc08g075450.2.1 Tomato plasma membrane 54.19 51.32
AT5G45370.2 Thale cress plasma membrane 54.47 51.18
Solyc08g075470.2.1 Tomato plasma membrane 54.47 51.05
CDY13057 Canola plasma membrane 54.47 50.78
CDY23125 Canola plasma membrane 54.47 50.78
Bra027604.1-P Field mustard plasma membrane 54.47 50.78
CDY13056 Canola plasma membrane 54.19 50.65
PGSC0003DMT400004947 Potato plasma membrane 53.91 50.52
Bra027605.1-P Field mustard plasma membrane 53.91 50.39
KRH28983 Soybean plasma membrane 54.75 50.26
CDY09279 Canola plasma membrane 55.87 50.25
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 55.87 50.25
CDY23124 Canola plasma membrane 53.63 50.13
AT4G19185.1 Thale cress plasma membrane 55.03 49.5
KRH28984 Soybean plasma membrane 50.0 49.45
CDX76488 Canola plasma membrane 54.75 49.25
Solyc08g075460.2.1 Tomato plasma membrane 52.79 49.09
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 54.75 47.46
CDX78925 Canola plasma membrane 51.4 46.94
KRH28985 Soybean plasma membrane 50.0 46.02
CDX99393 Canola mitochondrion 56.42 40.56
HORVU6Hr1G050960.1 Barley golgi, plasma membrane 25.98 38.75
HORVU7Hr1G095750.9 Barley cytosol, peroxisome 43.3 37.99
HORVU3Hr1G002710.4 Barley plasma membrane 29.33 25.99
HORVU3Hr1G001040.3 Barley golgi, peroxisome 29.61 25.18
HORVU1Hr1G063340.4 Barley peroxisome 23.74 23.42
HORVU0Hr1G023720.1 Barley plasma membrane 25.14 23.14
HORVU1Hr1G068120.1 Barley plasma membrane 25.14 23.14
HORVU6Hr1G080260.1 Barley plasma membrane 24.02 22.34
HORVU6Hr1G080220.1 Barley golgi, plasma membrane 24.02 22.16
HORVU6Hr1G080150.1 Barley plasma membrane 24.3 21.97
HORVU3Hr1G078710.1 Barley golgi, plasma membrane 22.63 21.49
HORVU5Hr1G044210.1 Barley golgi 22.63 21.43
HORVU6Hr1G080270.3 Barley plasma membrane 22.91 20.65
HORVU7Hr1G109820.1 Barley golgi, plasma membrane 20.39 20.0
HORVU4Hr1G080190.6 Barley peroxisome, plasma membrane 23.18 19.62
HORVU7Hr1G035430.6 Barley golgi 19.27 15.79
Protein Annotations
EnsemblPlants:HORVU6Hr1G068730.1EnsemblPlantsGene:HORVU6Hr1G068730GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF133PFAM:PF00892SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI000B473A38UniProt:A0A287UJT3MapMan:24.2.1.5::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287UJT3]
Coordinates
chrchr6H:+:476864536..476867530
Molecular Weight (calculated)
38176.8 Da
IEP (calculated)
9.295
GRAVY (calculated)
0.553
Length
358 amino acids
Sequence
(BLAST)
001: LANQWGKGSK RSSRYSDRGT TTGGSGSAAM AAAAAARDGE GRRAHAAMVG SQFINAGYHV IAKQALNVGV NRVVFCVYRD LLALCVLAPI AFFRHRGSPA
101: QARPPTVTRR LLTSFFFLGL TGIFGNQLLF LFGLGYTNPT YAAAIQPSIP VFTFILALIM GTETASLVTH EGRAKVGGTI VCVLGAVLMV LYRGAAVFGS
201: SELDLDVHSN HVITEMLQPE PGSSWFIAYG LEKWHIGVLC LIGNCLCMAT YLALQAPILV KYPCSLSLTA YSYFFGALLM LISGVFSTTS KEDWTLTGSE
301: FAAVVYAGVV SSALNTGLLT WSNKILGPAM VALYMPLQPV LSALLSVLFL GSPIYFGR
Best Arabidopsis Sequence Match ( AT3G45870.8 )
(BLAST)
001: MESTVEREAW KAHVAMIGVQ LFNGGYHVIT KVALNVGVNQ LVFCVFRDLI ALSILAPLAY IRDKRTRPPL NRQFLLAFFF LGLTGIFGNQ LLFLIGLNYT
101: NPTYAAAIQP SIPVFTFILA LIMGTERLNL FKLEGQAKVG GTLICVAGAV LMVLFRGLAL FGETEAESLG HGESRHTETS GHFMSGFFNG LGRWNLGVLC
201: LIGNCTCMAA FLAIQAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGRFN ISLLFS
Arabidopsis Description
WAT1-related protein At3g45870 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP32]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.