Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038272.1-P Field mustard plasma membrane 96.88 99.73
CDX86054 Canola plasma membrane 99.22 99.22
AT3G45870.1 Thale cress plasma membrane 91.67 91.43
VIT_02s0087g00880.t01 Wine grape plasma membrane 69.53 71.01
CDY09279 Canola plasma membrane 70.83 68.34
KRH07780 Soybean golgi, plasma membrane, plastid 67.97 67.27
KRH07254 Soybean plasma membrane 67.45 66.93
CDX76488 Canola plasma membrane 69.01 66.58
Solyc12g096160.1.1 Tomato plasma membrane 65.62 65.62
PGSC0003DMT400075315 Potato plasma membrane 65.36 65.36
KRH28983 Soybean plasma membrane 66.15 65.13
CDY23125 Canola plasma membrane 64.84 64.84
CDY13057 Canola plasma membrane 64.58 64.58
Solyc08g075450.2.1 Tomato plasma membrane 62.5 63.49
CDY23124 Canola plasma membrane 63.28 63.45
CDY13056 Canola plasma membrane 63.02 63.19
PGSC0003DMT400004947 Potato plasma membrane 62.76 63.09
KRH28984 Soybean plasma membrane 59.11 62.71
Solyc08g075470.2.1 Tomato plasma membrane 61.98 62.3
CDX78925 Canola plasma membrane 63.28 61.99
Solyc08g075460.2.1 Tomato plasma membrane 61.98 61.82
KRH28985 Soybean plasma membrane 62.5 61.7
Zm00001d017765_P002 Maize plasma membrane 60.94 59.54
KXG30925 Sorghum plasma membrane 60.68 59.29
TraesCS6D01G251700.1 Wheat plasma membrane 59.11 57.47
TraesCS6B01G298700.1 Wheat plasma membrane 58.85 57.22
HORVU6Hr1G068730.1 Barley golgi, mitochondrion, plasma membrane 52.6 56.42
Os02t0703900-02 Rice cytosol, golgi, plasma membrane 57.29 55.56
GSMUA_Achr9P23160_001 Banana plasma membrane 52.6 55.34
KXG30926 Sorghum plasma membrane 45.31 53.87
GSMUA_Achr4P12460_001 Banana golgi, plasma membrane, vacuole 52.6 52.6
CDX99393 Canola mitochondrion 67.45 52.01
HORVU6Hr1G050960.1 Barley golgi, plasma membrane 32.29 51.67
TraesCS6A01G271500.1 Wheat plasma membrane 58.07 51.15
TraesCS7B01G309300.1 Wheat plasma membrane 52.86 50.88
TraesCS7A01G409900.1 Wheat plasma membrane 52.6 50.63
TraesCS7D01G403100.2 Wheat plasma membrane 52.6 50.63
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 50.26 50.26
Os06t0708700-01 Rice plasma membrane 53.65 49.88
GSMUA_Achr3P27710_001 Banana plasma membrane 52.34 49.63
EER92186 Sorghum cytosol, golgi, peroxisome 49.74 48.97
Zm00001d036440_P003 Maize plasma membrane 52.08 48.66
KXG20824 Sorghum cytosol, golgi, peroxisome 52.86 47.99
Zm00001d047208_P001 Maize plasma membrane 48.18 47.68
Zm00001d029383_P001 Maize plastid 41.15 43.77
HORVU7Hr1G095750.9 Barley cytosol, peroxisome 45.31 42.65
CDX75960 Canola plasma membrane 29.95 38.98
CDY51934 Canola plasma membrane 29.95 38.98
CDX95542 Canola plasma membrane 29.17 36.72
CDX93689 Canola plasma membrane 33.85 36.11
CDY18510 Canola plasma membrane 33.59 35.83
CDY20378 Canola plasma membrane 35.42 35.23
CDY40602 Canola plasma membrane 27.34 35.12
CDX68127 Canola plasma membrane 34.9 34.72
CDY39037 Canola golgi, plasma membrane, vacuole 27.86 34.63
CDX85897 Canola plasma membrane 34.9 34.54
CDY47518 Canola golgi, plasma membrane, vacuole 34.64 34.28
CDY64209 Canola golgi, plasma membrane, vacuole 34.38 34.02
CDY45218 Canola plasma membrane 31.77 32.62
CDY00403 Canola plasma membrane 29.17 29.55
CDX79734 Canola golgi, plasma membrane, vacuole 27.08 28.73
CDY07788 Canola golgi, plasma membrane, vacuole 27.08 28.73
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 27.86 28.61
CDY01310 Canola plasma membrane 28.91 28.61
CDX99012 Canola plasma membrane 16.67 28.57
CDY53594 Canola plasma membrane 27.86 28.53
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 27.6 28.34
CDY04680 Canola plasma membrane 29.17 28.28
CDY20446 Canola plasma membrane 27.6 28.27
CDY07016 Canola plasma membrane 27.6 28.19
CDY22493 Canola plasma membrane 15.1 28.16
CDX79735 Canola golgi, plasma membrane, vacuole 20.57 27.92
CDY65383 Canola golgi, plasma membrane, vacuole 18.23 27.67
CDX93255 Canola plasma membrane 27.08 27.66
CDY49560 Canola golgi, plasma membrane, vacuole 26.82 27.61
CDY63388 Canola golgi, plasma membrane, vacuole 26.82 27.61
CDX93378 Canola cytosol, plasma membrane, vacuole 26.56 27.35
CDY18444 Canola plasma membrane 26.56 27.35
CDX94896 Canola plasma membrane 26.3 27.3
CDX74958 Canola plasma membrane 26.82 27.11
CDX91365 Canola plasma membrane 26.82 27.11
CDX76001 Canola plasma membrane 26.04 26.88
CDY14996 Canola plasma membrane 26.3 26.44
CDX70003 Canola plasma membrane 27.34 26.32
CDY12554 Canola plasma membrane 26.04 26.18
CDY09817 Canola plasma membrane 23.18 25.8
CDX72122 Canola plasma membrane 25.0 25.6
CDY68855 Canola plasma membrane 25.0 25.6
CDY56779 Canola plasma membrane 25.0 25.46
CDX79964 Canola plasma membrane 26.04 25.38
CDY63536 Canola plasma membrane 21.88 25.23
CDY53669 Canola plasma membrane 25.78 25.13
CDY29141 Canola plasma membrane 25.0 25.07
CDY68060 Canola plasma membrane 25.26 25.06
CDY06954 Canola plasma membrane 25.0 24.81
CDY14752 Canola plasma membrane 25.0 24.81
CDX75163 Canola plasma membrane 24.74 24.74
CDY35431 Canola plasma membrane 25.26 24.68
CDY65991 Canola plasma membrane 23.7 24.07
CDX85633 Canola plasma membrane 23.44 23.75
CDX91104 Canola plasma membrane 23.18 23.48
CDX99013 Canola golgi, plasma membrane, vacuole 7.29 17.95
Protein Annotations
EnsemblPlants:CDX99139EnsemblPlantsGene:GSBRNA2T00107297001GO:A0A078EE98GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF75PFAM:PF00892ProteinID:CDX99139ProteinID:CDX99139.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF0D99MapMan:24.2.1.5::
Description
BnaA06g18300D
Coordinates
chrLK031908:-:633658..635620
Molecular Weight (calculated)
41573.3 Da
IEP (calculated)
9.277
GRAVY (calculated)
0.540
Length
384 amino acids
Sequence
(BLAST)
001: MESEAWKAHV AMVCVQLFNG GYHVITKVAL NVGVNQLVFC VFRDLIALSI LAPLAYIRDK KTRPPLNRRF ILAFFFLGLT GIFGNQLLFL VGLNYTNPTY
101: AAAIQPSIPV FTFILALIMG TERLNLFKLE GQAKVGGTLV CVAGAVLMVL FRGPALFGET EVEFLGHGEI RHPEASGSGH LVSTFLSGIG RWNLGVLCLI
201: GNCTCMAAFL AIQACAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGSIL GGCAIIAGLY SVTWASYKEK KAAATGTIPI TSKEAEPLIY KDHKNKPMGH LFTNIPISSP KSAD
Best Arabidopsis Sequence Match ( AT3G45870.1 )
(BLAST)
001: MESTVEREAW KAHVAMIGVQ LFNGGYHVIT KVALNVGVNQ LVFCVFRDLI ALSILAPLAY IRDKRTRPPL NRQFLLAFFF LGLTGIFGNQ LLFLIGLNYT
101: NPTYAAAIQP SIPVFTFILA LIMGTERLNL FKLEGQAKVG GTLICVAGAV LMVLFRGLAL FGETEAESLG HGESRHTETS GHFMSGFFNG LGRWNLGVLC
201: LIGNCTCMAA FLAIQAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGSIL GGCAIIAGLY SVTWASYKEK KAAAAMAVIP ITSKEAEPLI YKDHKNKPIG HLFTKSPISS PKSDD
Arabidopsis Description
WAT1-related protein At3g45870 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP32]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.