Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68127 | Canola | plasma membrane | 98.45 | 98.96 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 96.65 | 96.65 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 95.88 | 95.88 |
| AT1G75500.1 | Thale cress | plasma membrane | 95.36 | 95.12 |
| CDY20378 | Canola | plasma membrane | 91.24 | 91.71 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 71.65 | 89.97 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 76.03 | 77.02 |
| KRH51770 | Soybean | plasma membrane | 77.06 | 76.86 |
| KRH61091 | Soybean | plasma membrane | 76.03 | 76.03 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 62.89 | 76.01 |
| KRH17381 | Soybean | plasma membrane | 75.26 | 75.06 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 74.23 | 74.42 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 63.4 | 74.32 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 73.71 | 74.29 |
| KRH05893 | Soybean | plasma membrane | 75.26 | 74.11 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 73.97 | 72.66 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 71.65 | 72.58 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 71.65 | 71.65 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 71.91 | 71.54 |
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 71.91 | 71.17 |
| Os08t0561500-01 | Rice | plasma membrane | 70.62 | 70.8 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 71.13 | 70.59 |
| EES15167 | Sorghum | plasma membrane | 71.91 | 69.58 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 60.31 | 68.02 |
| Zm00001d031913_P003 | Maize | plasma membrane | 70.62 | 67.49 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 51.8 | 64.63 |
| CDY51934 | Canola | plasma membrane | 45.62 | 60.0 |
| CDX75960 | Canola | plasma membrane | 45.36 | 59.66 |
| CDY40602 | Canola | plasma membrane | 45.36 | 58.86 |
| CDX93689 | Canola | plasma membrane | 53.87 | 58.06 |
| CDX95542 | Canola | plasma membrane | 45.36 | 57.7 |
| CDY18510 | Canola | plasma membrane | 52.58 | 56.67 |
| CDY45218 | Canola | plasma membrane | 52.06 | 54.01 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 57.99 | 53.44 |
| CDY65383 | Canola | golgi, plasma membrane, vacuole | 32.73 | 50.2 |
| CDY22493 | Canola | plasma membrane | 19.33 | 36.41 |
| CDX86054 | Canola | plasma membrane | 34.79 | 35.16 |
| CDX99139 | Canola | plasma membrane | 34.54 | 34.9 |
| CDY20446 | Canola | plasma membrane | 33.51 | 34.67 |
| CDY53594 | Canola | plasma membrane | 33.51 | 34.67 |
| CDY07016 | Canola | plasma membrane | 33.25 | 34.31 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 31.96 | 34.25 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 31.96 | 34.25 |
| CDY09279 | Canola | plasma membrane | 35.05 | 34.17 |
| CDY09817 | Canola | plasma membrane | 30.15 | 33.91 |
| CDX93255 | Canola | plasma membrane | 32.73 | 33.78 |
| CDX76488 | Canola | plasma membrane | 34.54 | 33.67 |
| CDX70003 | Canola | plasma membrane | 34.54 | 33.58 |
| CDX99012 | Canola | plasma membrane | 19.33 | 33.48 |
| CDY23125 | Canola | plasma membrane | 31.96 | 32.29 |
| CDY18444 | Canola | plasma membrane | 30.93 | 32.17 |
| CDY13056 | Canola | plasma membrane | 31.7 | 32.11 |
| CDY65991 | Canola | plasma membrane | 31.19 | 32.01 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 30.67 | 31.9 |
| CDY23124 | Canola | plasma membrane | 31.44 | 31.85 |
| CDX91365 | Canola | plasma membrane | 31.19 | 31.84 |
| CDX74958 | Canola | plasma membrane | 31.19 | 31.84 |
| CDX75163 | Canola | plasma membrane | 31.44 | 31.77 |
| CDY13057 | Canola | plasma membrane | 31.44 | 31.77 |
| CDX91104 | Canola | plasma membrane | 30.93 | 31.66 |
| CDX78925 | Canola | plasma membrane | 31.96 | 31.63 |
| CDY29141 | Canola | plasma membrane | 31.19 | 31.59 |
| CDX79964 | Canola | plasma membrane | 31.96 | 31.47 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 22.94 | 31.45 |
| CDX85633 | Canola | plasma membrane | 30.67 | 31.4 |
| CDY00403 | Canola | plasma membrane | 30.67 | 31.4 |
| CDY53669 | Canola | plasma membrane | 31.44 | 30.96 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 12.37 | 30.77 |
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.64 | 30.75 |
| CDX93377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.64 | 30.75 |
| CDY01310 | Canola | plasma membrane | 30.67 | 30.67 |
| CDX72122 | Canola | plasma membrane | 29.64 | 30.67 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 29.38 | 30.56 |
| CDX94896 | Canola | plasma membrane | 29.12 | 30.54 |
| CDY35431 | Canola | plasma membrane | 30.93 | 30.53 |
| CDY04680 | Canola | plasma membrane | 30.93 | 30.3 |
| CDY56779 | Canola | plasma membrane | 29.38 | 30.24 |
| CDY06954 | Canola | plasma membrane | 30.15 | 30.23 |
| CDX76001 | Canola | plasma membrane | 28.87 | 30.11 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 28.87 | 30.03 |
| CDY12554 | Canola | plasma membrane | 29.12 | 29.58 |
| CDY68060 | Canola | plasma membrane | 29.38 | 29.46 |
| CDY14996 | Canola | plasma membrane | 28.87 | 29.32 |
| CDY14752 | Canola | plasma membrane | 29.12 | 29.2 |
| CDY68855 | Canola | plasma membrane | 28.09 | 29.07 |
| CDY63536 | Canola | plasma membrane | 23.45 | 27.33 |
| CDX99393 | Canola | mitochondrion | 33.51 | 26.1 |
Protein Annotations
| EnsemblPlants:CDX85897 | EnsemblPlantsGene:GSBRNA2T00143715001 | GO:A0A078D9W8 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | PFAM:PF00892 | ProteinID:CDX85897 | ProteinID:CDX85897.1 |
| SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0001B63B70 | MapMan:24.2.1.5 | : |
Description
BnaC06g22370D
Coordinates
chrLK031843:-:649437..652205
Molecular Weight (calculated)
42458.4 Da
IEP (calculated)
9.208
GRAVY (calculated)
0.609
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MADNTDRRAI WGVPEKLQLH IAMLTLQFGY AGFHVVSRAA LNMGISKLVF PVYRNIIALL LLLPFAYFLE KKERPAITLN FLIQFFFLAL IGITANQGFY
101: LLGLDYTSPT FASSMQNSVP AITFLMAALL RIEKVRINRR DGISKVLGTA LCVAGASVIT LYKGPTIYTP TSHLHAHLLT TNSAILAPLG DAAPKNWTLG
201: CLYLIGHCLS WSGWLVFQAP VLKSYPARLS VTSYTLLFGI IQFVIIAAFC ERDSQAWAFH SGWELFTILY AGIVASGIAF AVQIWCIDRG GPVFVAVYQP
301: VQTLVVAIMA SIALGEEFYL GGIIGAVLII AGLYFVLYGK SEERKFAALE KAMIQSSAEH VIERAPVSRG SVKSSITAPL LHQSTDNV
101: LLGLDYTSPT FASSMQNSVP AITFLMAALL RIEKVRINRR DGISKVLGTA LCVAGASVIT LYKGPTIYTP TSHLHAHLLT TNSAILAPLG DAAPKNWTLG
201: CLYLIGHCLS WSGWLVFQAP VLKSYPARLS VTSYTLLFGI IQFVIIAAFC ERDSQAWAFH SGWELFTILY AGIVASGIAF AVQIWCIDRG GPVFVAVYQP
301: VQTLVVAIMA SIALGEEFYL GGIIGAVLII AGLYFVLYGK SEERKFAALE KAMIQSSAEH VIERAPVSRG SVKSSITAPL LHQSTDNV
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.