Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 90.03 | 92.83 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 85.8 | 73.39 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 67.07 | 71.84 |
| Os08t0561500-01 | Rice | plasma membrane | 79.76 | 68.22 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 78.25 | 67.62 |
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 79.46 | 67.09 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 78.25 | 66.75 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 78.55 | 66.67 |
| EES15167 | Sorghum | plasma membrane | 80.36 | 66.33 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 77.95 | 65.98 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 75.23 | 65.01 |
| KRH17381 | Soybean | plasma membrane | 76.13 | 64.78 |
| Zm00001d031913_P003 | Maize | plasma membrane | 79.46 | 64.78 |
| KRH51770 | Soybean | plasma membrane | 75.53 | 64.27 |
| KRH61091 | Soybean | plasma membrane | 75.23 | 64.18 |
| AT1G75500.1 | Thale cress | plasma membrane | 75.23 | 64.01 |
| CDX85897 | Canola | plasma membrane | 74.32 | 63.4 |
| Bra003751.1-P | Field mustard | plasma membrane | 73.41 | 62.95 |
| CDX68127 | Canola | plasma membrane | 73.41 | 62.95 |
| KRH05893 | Soybean | plasma membrane | 74.92 | 62.94 |
| Bra008201.1-P | Field mustard | plasma membrane | 74.02 | 62.82 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 73.41 | 62.63 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 64.95 | 62.5 |
| Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 73.11 | 62.37 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 73.11 | 62.37 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 71.3 | 61.3 |
| CDY20378 | Canola | plasma membrane | 70.39 | 60.36 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 71.9 | 60.25 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 54.68 | 58.2 |
| GSMUA_Achr6P09500_001 | Banana | golgi, plasma membrane | 60.12 | 55.12 |
| GSMUA_Achr10P... | Banana | plasma membrane | 59.82 | 54.7 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 60.42 | 47.51 |
| GSMUA_Achr9P17350_001 | Banana | golgi, plasma membrane | 35.35 | 32.77 |
| GSMUA_Achr2P10200_001 | Banana | plasma membrane | 32.33 | 32.52 |
| GSMUA_Achr3P09230_001 | Banana | plasma membrane | 37.76 | 32.3 |
| GSMUA_Achr2P22430_001 | Banana | plasma membrane | 35.05 | 31.35 |
| GSMUA_Achr2P14680_001 | Banana | golgi, plasma membrane | 32.63 | 31.03 |
| GSMUA_Achr6P08440_001 | Banana | plasma membrane | 34.74 | 30.67 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 31.12 | 30.65 |
| GSMUA_Achr3P01790_001 | Banana | golgi, plasma membrane | 34.44 | 30.48 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 35.05 | 30.37 |
| GSMUA_Achr4P24280_001 | Banana | plasma membrane | 33.53 | 29.84 |
| GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 32.93 | 29.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 33.53 | 29.13 |
| GSMUA_Achr9P23160_001 | Banana | plasma membrane | 30.82 | 27.95 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 31.12 | 27.91 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 27.19 | 27.36 |
| GSMUA_Achr7P00420_001 | Banana | plasma membrane | 27.49 | 27.33 |
| GSMUA_Achr4P12460_001 | Banana | golgi, plasma membrane, vacuole | 31.12 | 26.82 |
| GSMUA_Achr6P16060_001 | Banana | plasma membrane | 24.77 | 25.08 |
| GSMUA_Achr3P27710_001 | Banana | plasma membrane | 29.91 | 24.44 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP21050_001 | EnsemblPlants:GSMUA_AchrUn_randomT21050_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21050_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | PFAM:PF00892 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002952638 | UniProt:M0UB13 | MapMan:24.2.1.5 | : |
Description
Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21050_001]
Coordinates
chrchrUn_random:+:102413612..102416126
Molecular Weight (calculated)
35857.1 Da
IEP (calculated)
9.304
GRAVY (calculated)
0.576
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVDAKKVC GVPERVQLHV AMLALQFGYA GFHVVSRAAL NMGISKVVFP VYRNIIALIL LVPFAYFLEK KDRPALTLSF VVQFFLLALC GITANQGFYL
101: LGLDNTSPTF ASAIQNSVPA ITFLMAAILR QDSNTFTKKV RIDRRDGIAK LMGTLACAPV LKKYPARLSV TSYTCFFGVI QFLVIAAFIE RDAEAWKFHS
201: GSELFTILYA GFVASGIAFA VQIWCIDRGG PVFVAVYQPV QTLVVAIMAS IALREEFYLG GIIGAVFIIA GLYLVLWGKS EERAFAAKEA ALTASSTPDH
301: DGLRATTGAA SFKASSLKQP LLPSSTTPEN V
101: LGLDNTSPTF ASAIQNSVPA ITFLMAAILR QDSNTFTKKV RIDRRDGIAK LMGTLACAPV LKKYPARLSV TSYTCFFGVI QFLVIAAFIE RDAEAWKFHS
201: GSELFTILYA GFVASGIAFA VQIWCIDRGG PVFVAVYQPV QTLVVAIMAS IALREEFYLG GIIGAVFIIA GLYLVLWGKS EERAFAAKEA ALTASSTPDH
301: DGLRATTGAA SFKASSLKQP LLPSSTTPEN V
001: MCYQTSKKKR RSRKRRAQEE KEKMGKGVVS EKVKLVVALI TLQFCFAGFH IVSRVALNIG VSKVVYPVYR NLLALLLIGP FAYFFEKKER PPLTISLLAQ
101: FFFLALIGIT ANQGFYLLGL YYATPTFASA MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN
201: SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV
301: FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
101: FFFLALIGIT ANQGFYLLGL YYATPTFASA MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN
201: SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV
301: FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
Arabidopsis Description
WAT1-related protein At3g18200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV20]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.