Factsheet for GSMUA_Achr7P00420_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	31.53	31.25
GSMUA_Achr2P10200_001	Banana	plasma membrane	29.43	29.79
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	31.83	29.69
GSMUA_Achr4P00260_001	Banana	plasma membrane	32.43	28.27
GSMUA_Achr6P08440_001	Banana	plasma membrane	31.83	28.27
GSMUA_Achr1P06750_001	Banana	golgi, plasma membrane, vacuole	27.03	28.04
GSMUA_Achr2P22430_001	Banana	plasma membrane	30.93	27.84
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	27.33	27.49
GSMUA_Achr2P14680_001	Banana	golgi, plasma membrane	28.53	27.3
GSMUA_Achr6P09500_001	Banana	golgi, plasma membrane	29.43	27.15
GSMUA_Achr3P09230_001	Banana	plasma membrane	31.53	27.13
GSMUA_Achr7P21250_001	Banana	plastid	26.73	27.05
GSMUA_Achr3P01790_001	Banana	golgi, plasma membrane	30.33	27.01
GSMUA_AchrUn_...	Banana	plasma membrane	31.23	26.87
GSMUA_Achr8P14310_001	Banana	plasma membrane	29.73	26.83
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	30.03	26.81
GSMUA_Achr10P...	Banana	plasma membrane	29.13	26.8
GSMUA_Achr10P...	Banana	plasma membrane	30.33	26.51
GSMUA_Achr4P24280_001	Banana	plasma membrane	29.13	26.08
GSMUA_Achr6P16060_001	Banana	plasma membrane	23.72	24.16
GSMUA_Achr4P12460_001	Banana	golgi, plasma membrane, vacuole	22.22	19.27
GSMUA_Achr9P23160_001	Banana	plasma membrane	21.02	19.18
GSMUA_Achr3P27710_001	Banana	plasma membrane	21.02	17.28

Protein Annotations

EnsemblPlants:GSMUA_Achr7P00420_001	EnsemblPlants:GSMUA_Achr7T00420_001	EnsemblPlantsGene:GSMUA_Achr7G00420_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PFAM:PF00892	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000294BABB	UniProt:M0TDI2	MapMan:24.2.1.5	:	:	:

Description

Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00420_001]

Coordinates

chr7:-:332971..336210

Molecular Weight (calculated)

36254.6 Da

IEP (calculated)

6.918

GRAVY (calculated)

0.617

Length

333 amino acids

Sequence
(BLAST)

001: MSHYGFVLYR QIIAAVAICP LACFLDRYVH TDKVFYCMHS NIFLLALMGI SISQNFYYAG LAYTSSTFVS TMTNLQPAIT FLLAYLLRLE EVSIKNRTGQ
101: AKILGTFLCV GGAMVMTLFK DHNGGQGLQA QMDPIFSPHV RRLHGLGGGT SFVLGALFTI VGTTAWSAFL LYQACVVAQY PSQLTLSGLV NLVGGLQCAV
201: ISLIFEKPAA LKLGWDLQLL AIAYSGIFCA GFGVFAMMWC VKETGPVYVT AFSPVSTVMV AILEPLLLHV QLTWSSLIAM VMVIGGLFLF LWGKAQDSSK
301: TGESFAATHG VGEWDRNETS VYEEPSNQEP LLA

Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)

001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV

Arabidopsis Description

WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.