Factsheet for GSMUA_Achr10P20140_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
golgi 4
cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P09500_001	Banana	golgi, plasma membrane	89.23	89.47
Os01t0117900-02	Rice	plasma membrane	74.59	72.19
Zm00001d040089_P001	Maize	extracellular, golgi, plasma membrane	72.65	71.47
EES02603	Sorghum	plasma membrane	72.93	70.4
TraesCS3A01G019600.1	Wheat	plasma membrane	71.27	69.92
TraesCS3B01G026700.1	Wheat	plasma membrane	70.99	69.65
Os02t0331400-00	Rice	plasma membrane	63.81	69.58
TraesCS3D01G027300.1	Wheat	plasma membrane	71.27	69.17
KRH48595	Soybean	endoplasmic reticulum, plasma membrane	64.64	65.18
KRH39121	Soybean	plasma membrane	63.81	64.35
HORVU3Hr1G002710.4	Barley	plasma membrane	71.55	64.11
VIT_17s0000g03050.t01	Wine grape	plasma membrane	64.09	63.74
GSMUA_Achr1P06750_001	Banana	golgi, plasma membrane, vacuole	55.52	62.62
Bra018748.1-P	Field mustard	plasma membrane	62.15	62.5
PGSC0003DMT400014719	Potato	plasma membrane	61.88	62.4
Solyc03g118900.1.1	Tomato	plasma membrane	61.88	62.4
CDX75960	Canola	plasma membrane	50.83	62.37
CDY51934	Canola	plasma membrane	50.83	62.37
CDX93689	Canola	plasma membrane	61.88	62.22
CDY40602	Canola	plasma membrane	51.38	62.21
CDX95542	Canola	plasma membrane	51.93	61.64
GSMUA_AchrUn_...	Banana	plasma membrane	64.64	60.47
Bra001699.1-P	Field mustard	plasma membrane	58.56	60.4
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	54.7	59.82
CDY18510	Canola	plasma membrane	58.56	58.89
Bra021301.1-P	Field mustard	plasma membrane	58.29	58.61
KXG19264	Sorghum	plasma membrane	56.63	56.94
Zm00001d036123_P002	Maize	plasma membrane	55.52	56.15
AT3G18200.2	Thale cress	plasma membrane	58.84	55.61
GSMUA_Achr2P10200_001	Banana	plasma membrane	35.08	38.6
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	33.15	35.71
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	33.98	34.45
GSMUA_Achr2P22430_001	Banana	plasma membrane	34.25	33.51
GSMUA_Achr3P09230_001	Banana	plasma membrane	35.64	33.33
GSMUA_Achr6P08440_001	Banana	plasma membrane	34.25	33.07
GSMUA_Achr8P14310_001	Banana	plasma membrane	33.15	32.52
GSMUA_Achr4P00260_001	Banana	plasma membrane	33.98	32.2
GSMUA_Achr2P14680_001	Banana	golgi, plasma membrane	30.94	32.18
GSMUA_Achr10P...	Banana	plasma membrane	33.43	31.76
GSMUA_Achr3P01790_001	Banana	golgi, plasma membrane	32.6	31.55
GSMUA_Achr7P21250_001	Banana	plastid	28.18	31.0
GSMUA_Achr9P23160_001	Banana	plasma membrane	31.22	30.96
GSMUA_Achr4P24280_001	Banana	plasma membrane	31.49	30.65
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	31.49	30.56
GSMUA_Achr7P00420_001	Banana	plasma membrane	26.8	29.13
GSMUA_Achr4P12460_001	Banana	golgi, plasma membrane, vacuole	30.66	28.91
GSMUA_Achr6P16060_001	Banana	plasma membrane	25.41	28.13
GSMUA_Achr3P27710_001	Banana	plasma membrane	30.39	27.16

Protein Annotations

EnsemblPlants:GSMUA_Achr10P20140_001	EnsemblPlants:GSMUA_Achr10T20140_001	EnsemblPlantsGene:GSMUA_Achr10G20140_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF62	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00029650ED	UniProt:M0RJT9	MapMan:24.2.1.5	:

Description

Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G20140_001]

Coordinates

chr10:+:26257453..26259177

Molecular Weight (calculated)

39470.9 Da

IEP (calculated)

9.234

GRAVY (calculated)

0.601

Length

362 amino acids

Sequence
(BLAST)

001: MAGGSQSSEK VKLLVAVLAL QFSYAGFHIV SRTALNMGIS KLVFPVYRNV IALVLLAPFA YFLEKKDRPP LTLSLLCQFF LLALCGITAN QGFYLLGLYY
101: LSPTYASAIQ NSVPAITFAM AAALRLEQIN VNSRYGVAKV VGTVASIGGA TIITLYKGPP LLNHQQHSKL FLGASSNTIL NWTLGCVYIL GNCLAWSGWM
201: VLQVPLLKKY PARLSITTIT CFFGLIQFLI IAAFAEKDIE RWKVHSGGEL FTILYAGLVA SGVSFSLQIW CIDRGGPLFV AVFQPVQTVV VAIMAAVILG
301: DQLYSGGIIG SILIVLGLYF VLWGKSEEKK PTKEALENND LRRLLLDQEN LHKENAAVTD IP

Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)

001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV

Arabidopsis Description

WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.