Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P17350_001 | Banana | golgi, plasma membrane | 75.73 | 79.55 |
GSMUA_Achr3P09230_001 | Banana | plasma membrane | 80.8 | 78.29 |
GSMUA_Achr10P... | Banana | plasma membrane | 76.27 | 75.07 |
EES19520 | Sorghum | peroxisome | 75.47 | 70.93 |
Zm00001d010287_P002 | Maize | golgi, plasma membrane, vacuole | 76.53 | 70.17 |
GSMUA_Achr4P00260_001 | Banana | plasma membrane | 70.93 | 69.63 |
TraesCS1A01G256700.1 | Wheat | peroxisome | 72.53 | 67.49 |
TraesCS1B01G267300.1 | Wheat | plasma membrane | 72.27 | 67.08 |
TraesCS1D01G256100.1 | Wheat | golgi, peroxisome, plasma membrane | 72.53 | 67.0 |
VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 70.93 | 66.0 |
KRH62737 | Soybean | plasma membrane | 69.87 | 65.83 |
PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 66.4 | 65.18 |
KRH56218 | Soybean | plasma membrane | 68.8 | 65.15 |
KRH20615 | Soybean | plasma membrane | 70.93 | 65.04 |
Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 66.4 | 65.01 |
KRH13279 | Soybean | plasma membrane | 70.4 | 64.55 |
GSMUA_Achr6P16060_001 | Banana | plasma membrane | 54.93 | 63.0 |
CDX99012 | Canola | plasma membrane | 37.33 | 62.5 |
Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 64.8 | 61.83 |
PGSC0003DMT400072217 | Potato | plasma membrane | 63.47 | 61.82 |
Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 61.87 | 60.57 |
AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 63.73 | 59.45 |
GSMUA_Achr7P21250_001 | Banana | plastid | 52.0 | 59.27 |
CDX70003 | Canola | plasma membrane | 62.93 | 59.15 |
Os05t0409500-00 | Rice | mitochondrion | 76.53 | 58.93 |
Bra009296.1-P | Field mustard | plasma membrane | 62.13 | 58.4 |
HORVU1Hr1G063340.4 | Barley | peroxisome | 54.4 | 56.2 |
GSMUA_Achr2P14680_001 | Banana | golgi, plasma membrane | 47.2 | 50.86 |
GSMUA_Achr4P24280_001 | Banana | plasma membrane | 47.73 | 48.12 |
CDX99013 | Canola | golgi, plasma membrane, vacuole | 20.0 | 48.08 |
GSMUA_Achr3P01790_001 | Banana | golgi, plasma membrane | 46.93 | 47.06 |
GSMUA_Achr2P22430_001 | Banana | plasma membrane | 46.13 | 46.76 |
GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 45.07 | 45.31 |
GSMUA_Achr2P10200_001 | Banana | plasma membrane | 35.47 | 40.43 |
GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 35.2 | 39.29 |
GSMUA_Achr8P14310_001 | Banana | plasma membrane | 36.53 | 37.13 |
GSMUA_AchrUn_... | Banana | plasma membrane | 37.07 | 35.92 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 30.67 | 34.74 |
GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 29.6 | 34.58 |
GSMUA_Achr10P... | Banana | plasma membrane | 33.07 | 34.25 |
GSMUA_Achr6P09500_001 | Banana | golgi, plasma membrane | 32.8 | 34.07 |
GSMUA_Achr7P00420_001 | Banana | plasma membrane | 28.27 | 31.83 |
GSMUA_Achr9P23160_001 | Banana | plasma membrane | 29.87 | 30.68 |
GSMUA_Achr4P12460_001 | Banana | golgi, plasma membrane, vacuole | 28.27 | 27.6 |
GSMUA_Achr3P27710_001 | Banana | plasma membrane | 28.53 | 26.42 |
Protein Annotations
EnsemblPlants:GSMUA_Achr6P08440_001 | EnsemblPlants:GSMUA_Achr6T08440_001 | EnsemblPlantsGene:GSMUA_Achr6G08440_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF19 | PFAM:PF00892 | SEG:seg |
SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002964556 | UniProt:M0T593 | MapMan:24.2.1.5 | : |
Description
Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08440_001]
Coordinates
chr6:-:5615389..5617555
Molecular Weight (calculated)
41699.5 Da
IEP (calculated)
9.811
GRAVY (calculated)
0.609
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNQGSRRKL FQVCKPYAAM ISLQFGYAGM NILTKFSLNQ GMSHYVLVVY RHAFATLSIA PFALILERKV RPRMTFAIFM QIFVLGLLGP VIDQNFYYAG
101: LKFTSPTFSC AMSNMLPAMT FVLAVICRME KLDLKKVRCQ AKVVGTLVTV AGAMLMTLYK GPIMEMVWTK HMHAQAHQAV DVPVAADSAD KDWFKGCIFL
201: IIATLAWASL FILQAAALRR YNAPLSLTSL ICFVGTLQAI AVTFVTEHRL SVWRIGWDMN LLAAAYAGIV TSSIAYYVQG LVIQDKGPVF ASAFSPLMMI
301: LVAIMGSFIL SEKIYLGGII GAVLIVVGLY SVLWGKHKEN KEKTTEADIP PIIWKWEEMP VQSFMCPLIQ ASMLL
101: LKFTSPTFSC AMSNMLPAMT FVLAVICRME KLDLKKVRCQ AKVVGTLVTV AGAMLMTLYK GPIMEMVWTK HMHAQAHQAV DVPVAADSAD KDWFKGCIFL
201: IIATLAWASL FILQAAALRR YNAPLSLTSL ICFVGTLQAI AVTFVTEHRL SVWRIGWDMN LLAAAYAGIV TSSIAYYVQG LVIQDKGPVF ASAFSPLMMI
301: LVAIMGSFIL SEKIYLGGII GAVLIVVGLY SVLWGKHKEN KEKTTEADIP PIIWKWEEMP VQSFMCPLIQ ASMLL
001: MSMEEISSCE SFLTSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFSI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
Arabidopsis Description
WAT1-related protein At5g07050 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL41]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.