Factsheet for GSMUA_Achr2P10200_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g03130.t01	Wine grape	plasma membrane	55.32	54.98
VIT_02s0025g03140.t01	Wine grape	golgi, plasma membrane	60.18	54.25
VIT_02s0025g03120.t01	Wine grape	plasma membrane	54.71	53.1
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	41.64	38.38
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	37.08	36.31
GSMUA_Achr6P08440_001	Banana	plasma membrane	40.43	35.47
GSMUA_Achr10P...	Banana	plasma membrane	38.6	35.08
GSMUA_Achr10P...	Banana	plasma membrane	40.43	34.91
GSMUA_Achr6P09500_001	Banana	golgi, plasma membrane	37.39	34.07
GSMUA_Achr3P09230_001	Banana	plasma membrane	39.51	33.59
GSMUA_Achr8P14310_001	Banana	plasma membrane	37.08	33.06
GSMUA_Achr1P06750_001	Banana	golgi, plasma membrane, vacuole	31.91	32.71
GSMUA_Achr2P14680_001	Banana	golgi, plasma membrane	34.35	32.47
GSMUA_Achr4P00260_001	Banana	plasma membrane	37.69	32.46
GSMUA_Achr3P01790_001	Banana	golgi, plasma membrane	36.78	32.35
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	32.52	32.33
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	36.47	32.17
GSMUA_Achr2P22430_001	Banana	plasma membrane	35.87	31.89
GSMUA_Achr4P24280_001	Banana	plasma membrane	35.56	31.45
GSMUA_AchrUn_...	Banana	plasma membrane	36.47	31.01
GSMUA_Achr7P21250_001	Banana	plastid	30.7	30.7
GSMUA_Achr6P16060_001	Banana	plasma membrane	29.79	29.97
GSMUA_Achr7P00420_001	Banana	plasma membrane	29.79	29.43
GSMUA_Achr9P23160_001	Banana	plasma membrane	31.0	27.95
GSMUA_Achr4P12460_001	Banana	golgi, plasma membrane, vacuole	31.0	26.56
GSMUA_Achr3P27710_001	Banana	plasma membrane	28.88	23.46

Protein Annotations

EnsemblPlants:GSMUA_Achr2P10200_001	EnsemblPlants:GSMUA_Achr2T10200_001	EnsemblPlantsGene:GSMUA_Achr2G10200_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF58	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002969156	UniProt:M0S6R1	MapMan:24.2.1.5	:

Description

Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G10200_001]

Coordinates

chr2:-:13388456..13389960

Molecular Weight (calculated)

36673.0 Da

IEP (calculated)

9.280

GRAVY (calculated)

0.834

Length

329 amino acids

Sequence
(BLAST)

001: MKSTKACAPY LGIVVVQLAY AGSNILCKLA LEQGLSFLVF VVYRHLIALL ILAPLAYVLE RNRRPSLSFP LLVKVFILAM FGITIHQNVY YLGLDYTSPT
101: VASALSNVIP ALTFILTAIL RMEKASLRSP KGRARIVGTI FCISGALVFT FWKGFLLEGF VKRPLIEMHA EGDVHHKEDW LKGSVLILTS YIAYTAWLIL
201: QAIICEVYPA RLSLNTMICF FASLQSSAVA LVFERNAASW RLNWNLQLLT IIYCGTVISC LTYYLLTYCI GEKGPVFAAT FIPLQLVIVG FLSAFIFAER
301: LHIGSLIGVF IIIVGLYCVL WGKSRYSNE

Best Arabidopsis Sequence Match ( AT2G37460.1 )
(BLAST)

001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV

Arabidopsis Description

WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.