Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g03120.t01 | Wine grape | plasma membrane | 83.84 | 90.27 |
| VIT_02s0025g03130.t01 | Wine grape | plasma membrane | 80.82 | 89.12 |
| GSMUA_Achr2P10200_001 | Banana | plasma membrane | 54.25 | 60.18 |
| VIT_17s0000g03050.t01 | Wine grape | plasma membrane | 36.99 | 37.09 |
| VIT_07s0005g03080.t01 | Wine grape | plasma membrane | 35.34 | 35.44 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 36.71 | 34.99 |
| VIT_03s0017g02310.t01 | Wine grape | plasma membrane | 23.84 | 33.98 |
| VIT_13s0019g00500.t01 | Wine grape | plasma membrane | 34.52 | 33.96 |
| VIT_08s0040g00800.t01 | Wine grape | plasma membrane | 36.71 | 33.84 |
| VIT_18s0001g03180.t01 | Wine grape | plasma membrane | 35.34 | 33.77 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 37.26 | 33.75 |
| VIT_04s0023g02730.t01 | Wine grape | plasma membrane | 33.7 | 33.7 |
| VIT_18s0001g03160.t01 | Wine grape | golgi, plasma membrane | 35.89 | 33.5 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 33.42 | 33.15 |
| VIT_08s0040g02500.t01 | Wine grape | plasma membrane, vacuole | 34.79 | 31.59 |
| VIT_18s0001g03170.t01 | Wine grape | golgi, plasma membrane | 35.89 | 28.85 |
| VIT_02s0087g00880.t01 | Wine grape | plasma membrane | 27.95 | 27.13 |
Protein Annotations
| EntrezGene:100260287 | wikigene:100260287 | MapMan:24.2.1.5 | ProteinID:CBI34638 | ProteinID:CBI34638.3 | UniProt:D7TVW3 |
| InterPro:EamA_dom | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | EntrezGene:LOC100260287 | wikigene:LOC100260287 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF58 |
| SUPFAM:SSF103481 | TIGR:TC65676 | TMHMM:TMhelix | UniParc:UPI0001BE41D8 | ArrayExpress:VIT_02s0025g03140 | EnsemblPlantsGene:VIT_02s0025g03140 |
| EnsemblPlants:VIT_02s0025g03140.t01 | InterPro:WAT1-related | RefSeq:XP_002273800 | RefSeq:XP_002273800.2 | RefSeq:XP_002273800.3 | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7TVW3]
Coordinates
chr2:-:2660189..2662100
Molecular Weight (calculated)
40464.4 Da
IEP (calculated)
10.267
GRAVY (calculated)
0.572
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNWGPYGAM VLIQLAYGGS NILIKIAIDK GLNQIVFVVY RHIIAMLLLG PFAYVFERTQ RPSLSFSVMM KIFVLASLGT TVHLNVYYAG LHYTSATVAS
101: ALGNVIPGLT FLMAVLFRME EVRIRSARGR AKVLGTMVCI GGALTFTFWK GGYLFNGFTE RPLINVYSTK GSASEHHGGK NWIKGSVLIL ISHIAWSSWL
201: ILQAVVYKVY PARLSLNVLI CFFASLQSSF LALIFARNPV LWKLEWNVQL LTIIYCGVVI SGLVYYLQTW CISKRGPVFA AMFTPLLVIF VGIFSAVAFA
301: ERLHLSSLIG AFLIIAGLYI VLWGKRTDGR SEGISKSKKG LDDDKVLEIS INDQPGTNPI TNERK
101: ALGNVIPGLT FLMAVLFRME EVRIRSARGR AKVLGTMVCI GGALTFTFWK GGYLFNGFTE RPLINVYSTK GSASEHHGGK NWIKGSVLIL ISHIAWSSWL
201: ILQAVVYKVY PARLSLNVLI CFFASLQSSF LALIFARNPV LWKLEWNVQL LTIIYCGVVI SGLVYYLQTW CISKRGPVFA AMFTPLLVIF VGIFSAVAFA
301: ERLHLSSLIG AFLIIAGLYI VLWGKRTDGR SEGISKSKKG LDDDKVLEIS INDQPGTNPI TNERK
001: MMMEHKANMA MVFVQIVYAG MPLLSKVAIS QGTNPFVFVF YRQAFAALAL SPFAFFLESS KSSPLSFILL LKIFFISLCG LTLSLNLYYV AIENTTATFA
101: AATTNAIPSI TFVLALLFRL ETVTLKKSHG VAKVTGSMVG MLGALVFAFV KGPSLINHYN SSTIPNGTVP STKNSVKGSI TMLAANTCWC LWIIMQSKVM
201: KEYPAKLRLV ALQCLFSCIQ SAVWAVAVNR NPSVWKIEFG LPLLSMAYCG IMVTGLTYWL QVWAIEKKGP VFTALYTPLA LILTCIVSSF LFKETFYLGS
301: VGGAVLLVCG LYLGLWGKTK EEEIQRYGEK QSQKEIIEEV IIV
101: AATTNAIPSI TFVLALLFRL ETVTLKKSHG VAKVTGSMVG MLGALVFAFV KGPSLINHYN SSTIPNGTVP STKNSVKGSI TMLAANTCWC LWIIMQSKVM
201: KEYPAKLRLV ALQCLFSCIQ SAVWAVAVNR NPSVWKIEFG LPLLSMAYCG IMVTGLTYWL QVWAIEKKGP VFTALYTPLA LILTCIVSSF LFKETFYLGS
301: VGGAVLLVCG LYLGLWGKTK EEEIQRYGEK QSQKEIIEEV IIV
Arabidopsis Description
WAT1-related protein At1g43650 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.