Factsheet for VIT_18s0001g03180.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g03170.t01	Wine grape	golgi, plasma membrane	78.53	66.08
KRH18709	Soybean	golgi, plasma membrane, plastid	59.16	62.43
KRH16366	Soybean	plasma membrane	59.16	62.26
KRH64701	Soybean	plasma membrane	58.12	61.16
KRH16311	Soybean	extracellular, golgi, plasma membrane	53.14	59.01
KRH53219	Soybean	cytosol, golgi, plasma membrane, plastid	56.81	58.33
Bra010143.1-P	Field mustard	golgi, plasma membrane	53.14	57.67
CDY29141	Canola	plasma membrane	56.81	56.66
KRH53218	Soybean	plasma membrane	41.36	56.63
AT4G08290.1	Thale cress	plasma membrane	56.81	56.51
KRH64703	Soybean	plasma membrane	58.64	56.42
CDX75163	Canola	plasma membrane	56.54	56.25
KRH53217	Soybean	plasma membrane	57.59	56.12
VIT_18s0001g03160.t01	Wine grape	golgi, plasma membrane	56.81	55.5
KRH53220	Soybean	plasma membrane	51.05	53.42
KRH64700	Soybean	plasma membrane	50.79	53.01
KRH53222	Soybean	plasma membrane	49.74	52.05
KRH53221	Soybean	plasma membrane	48.17	50.83
KRH18768	Soybean	plasma membrane	23.3	49.17
VIT_08s0040g00800.t01	Wine grape	plasma membrane	48.43	46.72
KRH16313	Soybean	golgi, plasma membrane, vacuole	46.6	45.06
VIT_13s0019g00500.t01	Wine grape	plasma membrane	43.46	44.74
VIT_08s0040g02500.t01	Wine grape	plasma membrane, vacuole	46.86	44.53
VIT_13s0084g00090.t01	Wine grape	golgi, plasma membrane, plastid	45.29	42.93
KRH64698	Soybean	plasma membrane	43.72	42.39
VIT_03s0017g02310.t01	Wine grape	plasma membrane	26.7	39.84
VIT_05s0049g00450.t01	Wine grape	mitochondrion, plasma membrane	35.86	37.23
VIT_02s0025g03130.t01	Wine grape	plasma membrane	32.2	37.16
VIT_02s0025g03120.t01	Wine grape	plasma membrane	31.41	35.4
VIT_02s0025g03140.t01	Wine grape	golgi, plasma membrane	33.77	35.34
VIT_18s0001g13360.t01	Wine grape	plasma membrane	34.55	34.46
VIT_07s0005g03080.t01	Wine grape	plasma membrane	32.2	33.79
VIT_04s0023g02730.t01	Wine grape	plasma membrane	31.94	33.42
VIT_17s0000g03050.t01	Wine grape	plasma membrane	30.63	32.14
VIT_02s0087g00880.t01	Wine grape	plasma membrane	24.87	25.27

Protein Annotations

EntrezGene:100242002	wikigene:100242002	MapMan:24.2.1.5	ProteinID:CBI19039	ProteinID:CBI19039.3	UniProt:E0CR85
InterPro:EamA_dom	EMBL:FN595227	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0032973	GO:GO:0043090	GO:GO:0080144	EntrezGene:LOC100242002
wikigene:LOC100242002	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF38	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI00015C785C	ArrayExpress:VIT_18s0001g03180	EnsemblPlantsGene:VIT_18s0001g03180	EnsemblPlants:VIT_18s0001g03180.t01	unigene:Vvi.22662	InterPro:WAT1-related
RefSeq:XP_002284452	RefSeq:XP_002284452.2	SEG:seg	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:E0CR85]

Coordinates

chr18:-:3190049..3192531

Molecular Weight (calculated)

41467.5 Da

IEP (calculated)

9.368

GRAVY (calculated)

0.521

Length

382 amino acids

Sequence
(BLAST)

001: MEDQTSCAKI CVVFSRMKPY VLMVALQFGS AGMYIISMAT LNHGMSRFVL IVYRNAVAAL AMAPFALLLE RKIRPKITIA IFLKIMALGF LEPILDQNLS
101: YLGMQYTSAS FTSAVMNAVP AVTFVMAVVF RLEHIKIKER RSQAKIVGTV LTFSGALLMT LYKGPIIDLI WSHKTSHNAN HSSTDTHWIT GTLLILVGCC
201: AWSAFYILQS ITIKTYPAEL SLSTLICLMG AIQSGAVGLV AERHPSAWAI GWDSRLLAPV YTGIVSSGLT YYVQGLVMKT RGPVFVTAFN PLCMIIVAAL
301: GTLILAEQLH LGSIIGAIII AIGLYSVAWG KSKDQFGPTP TTTEEKGDAY ELPISATEGS KLVIEANNYG DHAGKSNFPV KK

Best Arabidopsis Sequence Match ( AT4G08290.1 )
(BLAST)

001: MEGVSATMHK LRPYLLMIFL QFGAAGTYIV IMATLNQGQN RYVVIVYRNL VAALVLAPFA LIFERKVRPK MTLSVLWKIM ALGFLEPVLD QGFGYLGMNM
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI

Arabidopsis Description

WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.