Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g03180.t01 | Wine grape | plasma membrane | 66.08 | 78.53 |
| KRH18709 | Soybean | golgi, plasma membrane, plastid | 48.9 | 61.33 |
| KRH16366 | Soybean | plasma membrane | 48.9 | 61.16 |
| KRH16311 | Soybean | extracellular, golgi, plasma membrane | 45.37 | 59.88 |
| KRH64701 | Soybean | plasma membrane | 47.8 | 59.78 |
| VIT_18s0001g03160.t01 | Wine grape | golgi, plasma membrane | 48.46 | 56.27 |
| Bra010143.1-P | Field mustard | golgi, plasma membrane | 43.39 | 55.97 |
| KRH53218 | Soybean | plasma membrane | 34.36 | 55.91 |
| KRH53219 | Soybean | cytosol, golgi, plasma membrane, plastid | 45.81 | 55.91 |
| AT4G08290.1 | Thale cress | plasma membrane | 46.92 | 55.47 |
| KRH64703 | Soybean | plasma membrane | 48.46 | 55.42 |
| KRH53217 | Soybean | plasma membrane | 47.8 | 55.36 |
| CDY29141 | Canola | plasma membrane | 46.7 | 55.35 |
| CDX75163 | Canola | plasma membrane | 46.48 | 54.95 |
| KRH18768 | Soybean | plasma membrane | 21.15 | 53.04 |
| KRH53220 | Soybean | plasma membrane | 41.19 | 51.23 |
| KRH64700 | Soybean | plasma membrane | 40.97 | 50.82 |
| KRH53222 | Soybean | plasma membrane | 40.75 | 50.68 |
| KRH53221 | Soybean | plasma membrane | 39.21 | 49.17 |
| KRH16313 | Soybean | golgi, plasma membrane, vacuole | 40.09 | 46.08 |
| VIT_08s0040g00800.t01 | Wine grape | plasma membrane | 39.87 | 45.71 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 39.21 | 44.17 |
| VIT_13s0019g00500.t01 | Wine grape | plasma membrane | 35.9 | 43.94 |
| VIT_08s0040g02500.t01 | Wine grape | plasma membrane, vacuole | 38.55 | 43.53 |
| KRH64698 | Soybean | plasma membrane | 35.46 | 40.86 |
| VIT_03s0017g02310.t01 | Wine grape | plasma membrane | 22.69 | 40.23 |
| VIT_02s0025g03130.t01 | Wine grape | plasma membrane | 27.53 | 37.76 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 29.74 | 36.68 |
| VIT_02s0025g03120.t01 | Wine grape | plasma membrane | 26.87 | 35.99 |
| VIT_02s0025g03140.t01 | Wine grape | golgi, plasma membrane | 28.85 | 35.89 |
| VIT_07s0005g03080.t01 | Wine grape | plasma membrane | 27.53 | 34.34 |
| VIT_04s0023g02730.t01 | Wine grape | plasma membrane | 27.53 | 34.25 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 28.85 | 34.2 |
| VIT_17s0000g03050.t01 | Wine grape | plasma membrane | 26.43 | 32.97 |
| VIT_02s0087g00880.t01 | Wine grape | plasma membrane | 20.93 | 25.27 |
Protein Annotations
| EntrezGene:100264284 | wikigene:100264284 | MapMan:24.2.1.5 | ProteinID:CCB45495 | ProteinID:CCB45495.1 | InterPro:EamA_dom |
| UniProt:F6H0S6 | EMBL:FN595227 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 | GO:GO:0080144 | EntrezGene:LOC100264284 |
| wikigene:LOC100264284 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF38 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000210A330 | ArrayExpress:VIT_18s0001g03170 | EnsemblPlantsGene:VIT_18s0001g03170 | EnsemblPlants:VIT_18s0001g03170.t01 | InterPro:WAT1-related | RefSeq:XP_002284458 |
| RefSeq:XP_002284458.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:3180624..3188491
Molecular Weight (calculated)
49848.7 Da
IEP (calculated)
9.342
GRAVY (calculated)
0.379
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MANQSGNSCI VYLNKMKPYL LMVALQFGSA GMYIICMATL THGMSRYVLV VYRNAVATLA IAPFALLLER KGRPKLTFSI FLKIMALGFL EPIVDQNLSY
101: LGMQYTSASY ASAIMNAVPA VTFVMAIIFR LEHIKIKETR TQAKIIGTLV TFSGALLMTL YKGPIIDIMH SHKASHQANH SSSKHWLIGT ILILMGCCAW
201: SAFFILQSIT IKAYPAELSL STLICLMGTV QSAAVGLIAE RKPRTWSIGW DSRLLAPVYT GIISSGITYY VQGLVMKTKG PVFVTAFNPL CMVIVAALGS
301: LILAEELHLG SIIGAIIIAV GLYSVAWGKS KDHFSPAPST TGEKTDPYQL PILATENTKL VIEGSNYDDD EKAAKSKEKT LSRKFRSSPG FKLCCKDCGC
401: SYFKIEGSQW SCVLRFRELA DAGFVQSLKK ATWEVCMPII YGSLHQPHYV NCFS
101: LGMQYTSASY ASAIMNAVPA VTFVMAIIFR LEHIKIKETR TQAKIIGTLV TFSGALLMTL YKGPIIDIMH SHKASHQANH SSSKHWLIGT ILILMGCCAW
201: SAFFILQSIT IKAYPAELSL STLICLMGTV QSAAVGLIAE RKPRTWSIGW DSRLLAPVYT GIISSGITYY VQGLVMKTKG PVFVTAFNPL CMVIVAALGS
301: LILAEELHLG SIIGAIIIAV GLYSVAWGKS KDHFSPAPST TGEKTDPYQL PILATENTKL VIEGSNYDDD EKAAKSKEKT LSRKFRSSPG FKLCCKDCGC
401: SYFKIEGSQW SCVLRFRELA DAGFVQSLKK ATWEVCMPII YGSLHQPHYV NCFS
001: MEGVSATMHK LRPYLLMIFL QFGAAGTYIV IMATLNQGQN RYVVIVYRNL VAALVLAPFA LIFERKVRPK MTLSVLWKIM ALGFLEPVLD QGFGYLGMNM
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
Arabidopsis Description
WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.