Factsheet for VIT_08s0040g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g078270.1.1	Tomato	golgi, plasma membrane, plastid	72.98	75.46
PGSC0003DMT400018488	Potato	golgi, plasma membrane, plastid	72.73	75.39
Solyc10g080990.1.1	Tomato	golgi, plasma membrane, plastid	71.72	72.26
PGSC0003DMT400072217	Potato	plasma membrane	70.2	72.21
VIT_13s0084g00090.t01	Wine grape	golgi, plasma membrane, plastid	71.97	70.72
Solyc10g080980.1.1	Tomato	golgi, plasma membrane, vacuole	67.68	69.97
VIT_18s0001g03160.t01	Wine grape	golgi, plasma membrane	49.75	50.38
VIT_08s0040g02500.t01	Wine grape	plasma membrane, vacuole	49.24	48.51
VIT_18s0001g03180.t01	Wine grape	plasma membrane	46.72	48.43
VIT_13s0019g00500.t01	Wine grape	plasma membrane	42.42	45.28
VIT_03s0017g02310.t01	Wine grape	plasma membrane	27.27	42.19
VIT_18s0001g03170.t01	Wine grape	golgi, plasma membrane	45.71	39.87
VIT_05s0049g00450.t01	Wine grape	mitochondrion, plasma membrane	36.62	39.4
VIT_02s0025g03130.t01	Wine grape	plasma membrane	32.32	38.67
VIT_18s0001g13360.t01	Wine grape	plasma membrane	36.62	37.86
VIT_04s0023g02730.t01	Wine grape	plasma membrane	34.6	37.53
VIT_02s0025g03120.t01	Wine grape	plasma membrane	31.57	36.87
VIT_02s0025g03140.t01	Wine grape	golgi, plasma membrane	33.84	36.71
VIT_17s0000g03050.t01	Wine grape	plasma membrane	33.33	36.26
VIT_07s0005g03080.t01	Wine grape	plasma membrane	32.58	35.44
VIT_02s0087g00880.t01	Wine grape	plasma membrane	27.02	28.46

Protein Annotations

EntrezGene:100241372	wikigene:100241372	MapMan:24.2.1.5	ProteinID:CBI32824	ProteinID:CBI32824.3	UniProt:D7TQV4
InterPro:EamA_dom	EMBL:FN596008	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100241372	wikigene:LOC100241372	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF19
SUPFAM:SSF103481	TIGR:TC55366	TMHMM:TMhelix	UniParc:UPI00015CB188	ArrayExpress:VIT_08s0040g00800	EnsemblPlantsGene:VIT_08s0040g00800
EnsemblPlants:VIT_08s0040g00800.t01	unigene:Vvi.19379	InterPro:WAT1-related	RefSeq:XP_002283348	RefSeq:XP_002283348.1	SEG:seg

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7TQV4]

Coordinates

chr8:-:11754205..11756489

Molecular Weight (calculated)

43530.2 Da

IEP (calculated)

9.461

GRAVY (calculated)

0.447

Length

396 amino acids

Sequence
(BLAST)

001: MEGKGCLGSF FQRCKPYIAM ISLQFGYAGM NIITKVSLNR GMSHYVLVVY RHAFATAVIA PFALVLERKV RPKITLPIFL QLFVLGLLGP VIDQNFYYAG
101: LKFTSPTFSC AMSNMLPAMT FVMAVLCRME KLDMKKFRCQ AKVVGTVVTV AGAMLMTLYK GPIVEMVWSK YVHPHNSNAA ENSGSSDKDW VKGSILLIIA
201: TFAWASFFIL QAITMRRYQA HLSLTSIVCF LGTLQSIAVT FVMEHRPSAW TIGWDMNLLA AAYAGIVSSS IAYYVQGLVM QKRGPVFVTA FSPLMMIIVA
301: IMGSFILAEK IFLGGVIGAV LIVAGLYSVL WGKYKEFKEK EAETIPEAIK GAGENGGMKT VMEETEEDND IEMQKSQANK LSTPAVAVQS VEAPKA

Best Arabidopsis Sequence Match ( AT5G07050.1 )
(BLAST)

001: MSMEEISSCE SFLTSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFSI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP

Arabidopsis Description

WAT1-related protein At5g07050 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL41]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.