Factsheet for VIT_04s0023g02730.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13360.t01	Wine grape	plasma membrane	67.4	64.23
AT3G53210.1	Thale cress	plasma membrane	58.36	57.72
KRH28737	Soybean	plasma membrane	56.99	57.46
CDY45218	Canola	plasma membrane	58.63	57.22
Bra012063.1-P	Field mustard	plasma membrane	58.36	56.95
EES06137	Sorghum	plasma membrane	59.73	56.48
Os02t0114100-00	Rice	plasma membrane	58.08	54.92
Zm00001d054055_P001	Maize	golgi, plasma membrane, vacuole	58.9	54.43
KRH76726	Soybean	plasma membrane	45.75	53.02
VIT_17s0000g03050.t01	Wine grape	plasma membrane	52.05	52.2
CDY65383	Canola	golgi, plasma membrane, vacuole	35.62	51.38
VIT_02s0025g03130.t01	Wine grape	plasma membrane	32.05	35.35
VIT_08s0040g00800.t01	Wine grape	plasma membrane	37.53	34.6
VIT_02s0025g03120.t01	Wine grape	plasma membrane	32.05	34.51
VIT_02s0087g00880.t01	Wine grape	plasma membrane	35.34	34.31
VIT_18s0001g03160.t01	Wine grape	golgi, plasma membrane	36.44	34.02
VIT_13s0084g00090.t01	Wine grape	golgi, plasma membrane, plastid	37.26	33.75
VIT_02s0025g03140.t01	Wine grape	golgi, plasma membrane	33.7	33.7
VIT_13s0019g00500.t01	Wine grape	plasma membrane	34.25	33.69
VIT_08s0040g02500.t01	Wine grape	plasma membrane, vacuole	36.16	32.84
VIT_18s0001g03180.t01	Wine grape	plasma membrane	33.42	31.94
VIT_05s0049g00450.t01	Wine grape	mitochondrion, plasma membrane	32.05	31.79
VIT_07s0005g03080.t01	Wine grape	plasma membrane	31.23	31.32
VIT_18s0001g03170.t01	Wine grape	golgi, plasma membrane	34.25	27.53
VIT_03s0017g02310.t01	Wine grape	plasma membrane	16.44	23.44

Protein Annotations

EntrezGene:100257561	wikigene:100257561	MapMan:24.2.1.5	EMBL:AM481783	ProteinID:CAN68618	ProteinID:CAN68618.1
ProteinID:CBI17428	ProteinID:CBI17428.3	UniProt:D7SP49	InterPro:EamA_dom	EMBL:FN594959	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100257561	wikigene:LOC100257561
PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF28	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00015CB798
ArrayExpress:VIT_04s0023g02730	EnsemblPlantsGene:VIT_04s0023g02730	EnsemblPlants:VIT_04s0023g02730.t01	unigene:Vvi.24193	InterPro:WAT1-related	RefSeq:XP_002267729
RefSeq:XP_002267729.1	SEG:seg	:	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7SP49]

Coordinates

chr4:-:19266192..19268641

Molecular Weight (calculated)

39564.9 Da

IEP (calculated)

9.873

GRAVY (calculated)

0.594

Length

365 amino acids

Sequence
(BLAST)

001: MRWVPDRANL HIAMNVFQFV YAGNHVILRT ALNMGISKLV FPAYRNIIAL AMIAPFAYFL EKKDRPALTA SFLVQFFLLA FVGITANQGF YLLGLDNTSP
101: TLASATENAV PAVTFLMAAI LRIEEVHLNR RDGKAKVLGT ICSVAGASII TIYKGPIIFR PSHPLNQSLP SISLGDAEGK NWTLGCVCLI GHCICWSGWI
201: VLQAPILKKY PAQLSVSSFT CFFAILQFLA VAGLIERNSQ AWLFHSRTEL FCVLYSGAVV SGIGFSIQLW AVGKAGPVFV SAYLPLQTLL VAVMASLALG
301: ERFYLGGVLG AVLILVGLYL VVWGKSEEGK FASRKAVIPS VAESSPSTNN RKSSVFQPLL PTSSK

Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)

001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV

Arabidopsis Description

WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.