Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010143.1-P | Field mustard | golgi, plasma membrane | 77.86 | 84.94 |
| CDX75163 | Canola | plasma membrane | 84.38 | 84.38 |
| CDY29141 | Canola | plasma membrane | 83.85 | 84.07 |
| KRH18709 | Soybean | golgi, plasma membrane, plastid | 54.69 | 58.01 |
| KRH64701 | Soybean | plasma membrane | 54.17 | 57.3 |
| KRH16366 | Soybean | plasma membrane | 54.17 | 57.3 |
| VIT_18s0001g03180.t01 | Wine grape | plasma membrane | 56.51 | 56.81 |
| KRH53219 | Soybean | cytosol, golgi, plasma membrane, plastid | 53.91 | 55.65 |
| KRH16311 | Soybean | extracellular, golgi, plasma membrane | 49.74 | 55.52 |
| KRH53218 | Soybean | plasma membrane | 38.28 | 52.69 |
| KRH53217 | Soybean | plasma membrane | 52.08 | 51.02 |
| KRH64703 | Soybean | plasma membrane | 52.34 | 50.63 |
| KRH53220 | Soybean | plasma membrane | 45.05 | 47.4 |
| KRH64700 | Soybean | plasma membrane | 45.05 | 47.27 |
| VIT_18s0001g03170.t01 | Wine grape | golgi, plasma membrane | 55.47 | 46.92 |
| KRH53221 | Soybean | plasma membrane | 43.49 | 46.13 |
| AT4G08300.1 | Thale cress | plasma membrane | 44.01 | 45.31 |
| KRH53222 | Soybean | plasma membrane | 42.45 | 44.66 |
| AT2G39510.1 | Thale cress | plasma membrane | 43.23 | 44.38 |
| AT1G44800.1 | Thale cress | plasma membrane | 42.71 | 44.32 |
| KRH18768 | Soybean | plasma membrane | 20.83 | 44.2 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 43.49 | 43.95 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 38.02 | 43.45 |
| AT1G21890.1 | Thale cress | plasma membrane | 44.01 | 43.44 |
| KRH16313 | Soybean | golgi, plasma membrane, vacuole | 42.97 | 41.77 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 39.32 | 37.56 |
| AT3G56620.1 | Thale cress | plasma membrane | 36.46 | 37.14 |
| KRH64698 | Soybean | plasma membrane | 38.02 | 37.06 |
| AT5G13670.1 | Thale cress | plasma membrane | 36.2 | 36.87 |
| AT2G40900.1 | Thale cress | plasma membrane | 36.98 | 36.04 |
| AT1G75500.1 | Thale cress | plasma membrane | 33.33 | 32.9 |
| AT3G18200.2 | Thale cress | plasma membrane | 32.55 | 32.64 |
| AT3G53210.1 | Thale cress | plasma membrane | 30.99 | 32.25 |
| AT4G24980.1 | Thale cress | plasma membrane | 21.09 | 30.0 |
| AT5G45370.2 | Thale cress | plasma membrane | 25.52 | 25.72 |
| AT4G19185.1 | Thale cress | plasma membrane | 26.56 | 25.63 |
| AT3G45870.1 | Thale cress | plasma membrane | 25.52 | 25.45 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:826383 | ProteinID:AEE82621.1 | ProteinID:AEE82622.1 | EMBL:AK118606 | ArrayExpress:AT4G08290 |
| EnsemblPlantsGene:AT4G08290 | RefSeq:AT4G08290 | TAIR:AT4G08290 | RefSeq:AT4G08290-TAIR-G | EnsemblPlants:AT4G08290.1 | TAIR:AT4G08290.1 |
| EMBL:AY088024 | EMBL:BT005333 | ProteinID:CAB45799.1 | ProteinID:CAB77954.1 | InterPro:EamA_dom | GO:GO:0003333 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 |
| GO:GO:0043090 | GO:GO:0055085 | GO:GO:0080144 | RefSeq:NP_001319882.1 | RefSeq:NP_192569.1 | PFAM:PF00892 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF38 | UniProt:Q9SUF1 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000009E7E7 |
| InterPro:WAT1-related | SEG:seg | : | : | : | : |
Description
WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]
Coordinates
chr4:+:5238773..5241112
Molecular Weight (calculated)
41725.7 Da
IEP (calculated)
8.786
GRAVY (calculated)
0.518
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVSATMHK LRPYLLMIFL QFGAAGTYIV IMATLNQGQN RYVVIVYRNL VAALVLAPFA LIFERKVRPK MTLSVLWKIM ALGFLEPVLD QGFGYLGMNM
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.