Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53669 | Canola | plasma membrane | 88.07 | 88.07 |
| Bra004592.1-P | Field mustard | plasma membrane | 87.56 | 87.56 |
| CDX79964 | Canola | plasma membrane | 87.56 | 87.56 |
| CDY14752 | Canola | plasma membrane | 84.01 | 85.53 |
| CDY68060 | Canola | plasma membrane | 83.76 | 85.27 |
| CDY35431 | Canola | plasma membrane | 84.77 | 84.99 |
| Bra016963.1-P | Field mustard | plasma membrane | 83.25 | 84.75 |
| CDY06954 | Canola | plasma membrane | 83.25 | 84.75 |
| Bra000212.1-P | Field mustard | plasma membrane | 84.52 | 84.73 |
| CDY22493 | Canola | plasma membrane | 43.65 | 83.5 |
| AT3G56620.1 | Thale cress | plasma membrane | 69.04 | 72.15 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 48.73 | 47.76 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 41.37 | 42.89 |
| AT1G21890.1 | Thale cress | plasma membrane | 42.13 | 42.67 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 34.01 | 39.88 |
| AT2G39510.1 | Thale cress | plasma membrane | 37.31 | 39.3 |
| AT1G44800.1 | Thale cress | plasma membrane | 36.29 | 38.65 |
| AT5G13670.1 | Thale cress | plasma membrane | 36.29 | 37.93 |
| AT4G08300.1 | Thale cress | plasma membrane | 35.79 | 37.8 |
| AT4G08290.1 | Thale cress | plasma membrane | 36.04 | 36.98 |
| AT1G75500.1 | Thale cress | plasma membrane | 31.73 | 32.13 |
| AT4G24980.1 | Thale cress | plasma membrane | 21.83 | 31.85 |
| AT3G18200.2 | Thale cress | plasma membrane | 30.46 | 31.33 |
| AT3G53210.1 | Thale cress | plasma membrane | 28.93 | 30.89 |
| AT5G45370.2 | Thale cress | plasma membrane | 25.13 | 25.98 |
| AT4G19185.1 | Thale cress | plasma membrane | 24.37 | 24.12 |
| AT3G45870.1 | Thale cress | plasma membrane | 23.1 | 23.64 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:818687 | UniProt:A0A178VVN5 | ProteinID:AAB86450.1 | ProteinID:AEC09894.1 | EMBL:AK226262 |
| ArrayExpress:AT2G40900 | EnsemblPlantsGene:AT2G40900 | RefSeq:AT2G40900 | TAIR:AT2G40900 | RefSeq:AT2G40900-TAIR-G | EnsemblPlants:AT2G40900.1 |
| TAIR:AT2G40900.1 | Unigene:At.42898 | InterPro:EamA_dom | UniProt:F4IJ08 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006868 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0015186 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0044746 | GO:GO:0048316 | GO:GO:0055085 | RefSeq:NP_181622.2 | ProteinID:OAP09103.1 |
| PFAM:PF00892 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 |
| PANTHER:PTHR31218:SF9 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0000196E4B | InterPro:WAT1-related | SEG:seg |
Description
WAT1-related protein At2g40900 [Source:UniProtKB/Swiss-Prot;Acc:F4IJ08]
Coordinates
chr2:-:17063098..17065813
Molecular Weight (calculated)
43051.4 Da
IEP (calculated)
8.537
GRAVY (calculated)
0.575
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRSKMT FPIFMRIFLL ALLGPVIDQN LYYIGLKLTS
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.