Factsheet for AT4G24980.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 3
extracellular 2
golgi 2
plasma membrane 4
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G13670.1	Thale cress	plasma membrane	45.19	32.36
Solyc06g031710.2.1	Tomato	plasma membrane	34.81	25.82
AT2G39510.1	Thale cress	plasma membrane	35.56	25.67
VIT_13s0019g00500.t01	Wine grape	plasma membrane	35.19	25.61
PGSC0003DMT400076318	Potato	plasma membrane	33.7	24.86
AT2G37450.2	Thale cress	extracellular, golgi, vacuole	30.0	24.11
AT4G08300.1	Thale cress	plasma membrane	32.59	23.59
AT1G21890.1	Thale cress	plasma membrane	33.33	23.14
AT3G56620.1	Thale cress	plasma membrane	31.48	22.55
PGSC0003DMT400071320	Potato	plasma membrane	31.48	22.55
AT2G37460.1	Thale cress	cytosol, plasma membrane, vacuole	31.48	22.37
AT1G75500.1	Thale cress	plasma membrane	31.85	22.11
AT5G07050.1	Thale cress	golgi, plasma membrane, vacuole	32.59	21.89
AT2G40900.1	Thale cress	plasma membrane	31.85	21.83
Solyc04g011340.2.1	Tomato	plasma membrane	30.37	21.81
AT1G44800.1	Thale cress	plasma membrane	29.26	21.35
AT3G53210.1	Thale cress	plasma membrane	28.89	21.14
AT4G08290.1	Thale cress	plasma membrane	30.0	21.09
AT3G18200.2	Thale cress	plasma membrane	28.52	20.1
AT5G45370.2	Thale cress	plasma membrane	26.67	18.9
AT4G19185.1	Thale cress	plasma membrane	27.41	18.59
AT3G45870.1	Thale cress	plasma membrane	25.19	17.66

Protein Annotations

MapMan:24.2.1.5	EntrezGene:828601	ProteinID:AEE84988.1	ArrayExpress:AT4G24980	EnsemblPlantsGene:AT4G24980	RefSeq:AT4G24980
TAIR:AT4G24980	RefSeq:AT4G24980-TAIR-G	EnsemblPlants:AT4G24980.1	TAIR:AT4G24980.1	Unigene:At.54508	UniProt:F4JRS9
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0032973	GO:GO:0043090	GO:GO:0055085	GO:GO:0080144	RefSeq:NP_194228.4	PANTHER:PTHR31218
PANTHER:PTHR31218:SF141	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001A7B0FD	InterPro:WAT1-related	SEG:seg

Description

Nodulin MtN21 /EamA-like transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JRS9]

Coordinates

chr4:-:12846797..12848376

Molecular Weight (calculated)

30236.8 Da

IEP (calculated)

10.304

GRAVY (calculated)

0.367

Length

270 amino acids

Sequence
(BLAST)

001: MSVIAKYALD YGLSPRIFVA ARLVIAFSIL SPLALVFERP LLEQNLYYTG MQLTTPTFTS GMFNLLPAIT FVMACIFRLE KVAIHSHRGK AKVLGTCVAV
101: AGAMLMTFWR GQVIPLPWNS LLHAKKIHRH DEDILRGGLM LVCSCLSWSF YVILQRNKLK ALKLHPNVTV LDVSQQQRFT LLGGWHRRRV SIFNPINLIA
201: TAVISSVVLS EQMFVGRIIG AFVIIIGISF VLWGKMGEQT TPPPPPPPPE PEATEKEMKI VRDGRPFVEE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.