Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g071920.2.1 | |
| Solyc03g005980.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G39510.1 | Solyc02g071920.2.1 | AT4G19030.1 | 21798944 |
| AT2G39510.1 | Solyc03g005980.2.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076318 | Potato | plasma membrane | 95.33 | 94.81 |
| Solyc04g011340.2.1 | Tomato | plasma membrane | 68.96 | 66.76 |
| VIT_13s0019g00500.t01 | Wine grape | plasma membrane | 55.77 | 54.72 |
| CDY20446 | Canola | plasma membrane | 55.49 | 53.87 |
| Bra005033.1-P | Field mustard | plasma membrane | 55.22 | 53.6 |
| Bra017068.1-P | Field mustard | plasma membrane | 55.22 | 53.6 |
| CDY53594 | Canola | plasma membrane | 55.22 | 53.6 |
| CDY07016 | Canola | plasma membrane | 55.22 | 53.46 |
| AT2G39510.1 | Thale cress | plasma membrane | 54.67 | 53.21 |
| CDX93255 | Canola | plasma membrane | 54.95 | 53.19 |
| Solyc09g010360.2.1 | Tomato | golgi, plasma membrane, vacuole | 51.92 | 50.4 |
| CDY09817 | Canola | plasma membrane | 43.68 | 46.09 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 47.25 | 44.91 |
| Solyc11g012930.1.1 | Tomato | golgi, plasma membrane | 45.05 | 44.44 |
| CDX91104 | Canola | plasma membrane | 44.78 | 43.01 |
| CDX85633 | Canola | plasma membrane | 44.51 | 42.74 |
| Solyc12g098280.1.1 | Tomato | extracellular, golgi | 32.97 | 42.55 |
| Bra023428.1-P | Field mustard | plasma membrane | 44.23 | 42.48 |
| CDY65991 | Canola | plasma membrane | 43.96 | 42.33 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 44.23 | 42.04 |
| Bra008810.1-P | Field mustard | plasma membrane | 41.21 | 42.02 |
| AT5G13670.1 | Thale cress | plasma membrane | 43.13 | 41.64 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 43.96 | 40.71 |
| Solyc09g089860.2.1 | Tomato | plasma membrane | 36.26 | 36.16 |
| Solyc04g012070.1.1 | Tomato | plasma membrane | 34.07 | 35.13 |
| AT4G24980.1 | Thale cress | plasma membrane | 25.82 | 34.81 |
| Solyc03g005480.2.1 | Tomato | plasma membrane | 34.34 | 34.34 |
| Solyc03g118900.1.1 | Tomato | plasma membrane | 32.97 | 33.43 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 32.69 | 30.91 |
| Solyc08g075450.2.1 | Tomato | plasma membrane | 29.95 | 28.84 |
| Solyc08g075470.2.1 | Tomato | plasma membrane | 29.4 | 28.01 |
| Solyc08g075460.2.1 | Tomato | plasma membrane | 29.12 | 27.53 |
| Solyc12g096160.1.1 | Tomato | plasma membrane | 28.3 | 26.82 |
Protein Annotations
| MapMan:24.2.1.5 | InterPro:EamA_dom | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 | GO:GO:0080144 | UniProt:K4C4J4 |
| PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF18 | SUPFAM:SSF103481 | EnsemblPlantsGene:Solyc06g031710.2 | EnsemblPlants:Solyc06g031710.2.1 |
| TMHMM:TMhelix | UniParc:UPI0002765942 | InterPro:WAT1-related | : | : | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4C4J4]
Coordinates
chr6:+:20809015..20811730
Molecular Weight (calculated)
39711.2 Da
IEP (calculated)
9.086
GRAVY (calculated)
0.572
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWLFKFVKE GKAYLAVTLL QFGYAGSAII AKSALNHGMS HFTFAVYRNV FATIVFAPFA LVFERKIRPK MSISIFLKIM LLGLVEPVID QNLYYTGLRY
101: TTATSAAAMC NLLPALTFLL AWILRLEKVN IMRLSSQAKI IGTTVTFGGA MIMTLVGGPT IGLPWTRHDH INIIPSSTTD LQPIKGALFI AAGCICWACF
201: YNLQAITLKT YPASLSLTCL ICSAGALQGT LLTLVVERGN TSIWAIQWDT TFLSYVYSGM VTSGVGYYVS GLIMKEKGPV FVTAFNPLNM VIVAILGSFI
301: LSEELNLGRV LGGAIIVIGL YLVIWGKSKD QQSLSIEETA QSEFVDQKEI SKSSNQAKVG DESV
101: TTATSAAAMC NLLPALTFLL AWILRLEKVN IMRLSSQAKI IGTTVTFGGA MIMTLVGGPT IGLPWTRHDH INIIPSSTTD LQPIKGALFI AAGCICWACF
201: YNLQAITLKT YPASLSLTCL ICSAGALQGT LLTLVVERGN TSIWAIQWDT TFLSYVYSGM VTSGVGYYVS GLIMKEKGPV FVTAFNPLNM VIVAILGSFI
301: LSEELNLGRV LGGAIIVIGL YLVIWGKSKD QQSLSIEETA QSEFVDQKEI SKSSNQAKVG DESV
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Arabidopsis Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.