Factsheet for Solyc11g012930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 3
golgi 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g074170.2.1
Solyc07g066170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G44800.1	Solyc07g066170.2.1	AT4G26455.1	21798944
AT1G44800.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT1G44800.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002407	Potato	golgi, plasma membrane	95.12	95.38
VIT_18s0001g03160.t01	Wine grape	golgi, plasma membrane	60.98	57.54
AT4G08300.1	Thale cress	plasma membrane	56.1	55.5
Bra010139.1-P	Field mustard	golgi, plasma membrane, vacuole	55.28	54.69
CDY49560	Canola	golgi, plasma membrane, vacuole	55.28	54.69
KRH16315	Soybean	golgi, nucleus, plastid	57.18	54.52
CDY63388	Canola	golgi, plasma membrane, vacuole	55.01	54.42
KRH18766	Soybean	golgi, nucleus, plasma membrane	57.18	54.24
KRH64697	Soybean	golgi, nucleus, plasma membrane	57.72	54.06
AT1G44800.1	Thale cress	plasma membrane	53.93	53.78
CDY00403	Canola	plasma membrane	54.74	53.3
KRH53223	Soybean	golgi, nucleus, plasma membrane	57.45	53.13
Bra040619.1-P	Field mustard	plasma membrane	54.74	52.88
CDY14996	Canola	plasma membrane	54.47	52.62
Bra014029.1-P	Field mustard	plasma membrane	53.66	52.38
CDY12554	Canola	plasma membrane	54.2	52.36
Bra012297.1-P	Field mustard	plasma membrane	50.95	51.79
CDY01310	Canola	plasma membrane	54.2	51.55
CDY04680	Canola	plasma membrane	53.39	49.75
AT1G21890.1	Thale cress	plasma membrane	52.3	49.61
Solyc10g078270.1.1	Tomato	golgi, plasma membrane, plastid	49.05	47.26
Solyc09g010360.2.1	Tomato	golgi, plasma membrane, vacuole	47.97	47.2
Solyc06g031710.2.1	Tomato	plasma membrane	44.44	45.05
Solyc10g080980.1.1	Tomato	golgi, plasma membrane, vacuole	45.53	43.86
Solyc10g080990.1.1	Tomato	golgi, plasma membrane, plastid	45.26	42.49
Solyc04g011340.2.1	Tomato	plasma membrane	42.28	41.49
Solyc12g098280.1.1	Tomato	extracellular, golgi	28.46	37.23
Solyc04g012070.1.1	Tomato	plasma membrane	33.06	34.56
Solyc09g089860.2.1	Tomato	plasma membrane	34.15	34.52
Solyc04g080940.2.1	Tomato	extracellular, plasma membrane	34.96	33.51
Solyc03g005480.2.1	Tomato	plasma membrane	30.89	31.32
Solyc03g118900.1.1	Tomato	plasma membrane	30.08	30.92
Solyc08g075470.2.1	Tomato	plasma membrane	26.29	25.39
Solyc08g075450.2.1	Tomato	plasma membrane	25.47	24.87
Solyc08g075460.2.1	Tomato	plasma membrane	25.75	24.68
Solyc12g096160.1.1	Tomato	plasma membrane	24.66	23.7

Protein Annotations

MapMan:24.2.1.5	InterPro:EamA_dom	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0032973	GO:GO:0043090	GO:GO:0080144	UniProt:K4D697
PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF12	SUPFAM:SSF103481	EnsemblPlantsGene:Solyc11g012930.1	EnsemblPlants:Solyc11g012930.1.1
TMHMM:TMhelix	UniParc:UPI000276A292	InterPro:WAT1-related	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4D697]

Coordinates

chr11:+:5776686..5779737

Molecular Weight (calculated)

40403.4 Da

IEP (calculated)

9.563

GRAVY (calculated)

0.593

Length

369 amino acids

Sequence
(BLAST)

001: MAGEFSSLVN KIKPYLAMVS LQFGYAGMYI VTMMCFKRGM SHWILVVYRH AFATIAVAPF AIVLERKIRP KMTRRVFIKI VALGFLEPVI DQNLYYLGLK
101: STTATYASAF VNLLPAVTFI LAVVFRIEKV NLKKKSSMAK VIGTAITVAG AMVMTLYKGP MFNLVPRHGG AHHEASVAAP ENWVAGTIEL IACIVGWSGF
201: FIVQSMTLKE YPAELSLAAW VCVMGVVEGG IVALIMERDW NAWVIGFDSR LLAAAYSGIV CSGIAYYVQS VVNKVKGPVF VTAFSPLSMV ITSILAAIIL
301: AESVHLGSLI GAIIIVMGLY SVVWGKSKEG KINDITSKDQ ELPVVDIKER STIVDDNINE KKTSIYQEH

Best Arabidopsis Sequence Match ( AT4G08300.1 )
(BLAST)

001: MKGGKMDKLK PIIAIISLQF GYAGMYIITM VSFKHGMNHW ILATYRHVVA TIVIAPFALI LERKIRPKMT WPLFLRILAL GFLEPLLDQN LYYIGMKATS
101: ATYSSAFVNA LPAITFIMAV IFRIETVNLK KTRSLAKVIG TAITVGGAMV MTLYKGPAIE LFKTAHSSLH GGSSGTSSET TDQNWVTGTL AVMGSITTWA
201: GFFILQSFTL KKYPAELSLV MWICAMGTVL NTIASLIMVR DVSAWKVGMD SGTLAAVYSG VVCSGMAYYI QSIVIRERGP VFTTSFSPMC MIITAFLGVL
301: VLAEKIHLGS IIGAIFIVFG LYSVVWGKAK DEVISVEEKI GMQELPITNT STKVEGGGIT SEVNEGVTNN TQV

Arabidopsis Description

WAT1-related protein At4g08300 [Source:UniProtKB/Swiss-Prot;Acc:Q501F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.