Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G44800.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT1G44800.1 | KRH62532 | AT4G26455.1 | 21798944 |
| AT1G44800.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT1G44800.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53223 | Soybean | golgi, nucleus, plasma membrane | 96.19 | 94.99 |
| KRH16315 | Soybean | golgi, nucleus, plastid | 74.62 | 75.97 |
| KRH18766 | Soybean | golgi, nucleus, plasma membrane | 73.86 | 74.81 |
| AT4G08300.1 | Thale cress | plasma membrane | 59.9 | 63.27 |
| Bra010139.1-P | Field mustard | golgi, plasma membrane, vacuole | 59.39 | 62.73 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 59.39 | 62.73 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 59.14 | 62.47 |
| VIT_18s0001g03160.t01 | Wine grape | golgi, plasma membrane | 60.15 | 60.61 |
| AT1G44800.1 | Thale cress | plasma membrane | 56.35 | 60.0 |
| CDY14996 | Canola | plasma membrane | 57.11 | 58.9 |
| Bra040619.1-P | Field mustard | plasma membrane | 56.85 | 58.64 |
| CDY12554 | Canola | plasma membrane | 56.6 | 58.38 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 54.06 | 57.88 |
| Solyc11g012930.1.1 | Tomato | golgi, plasma membrane | 54.06 | 57.72 |
| Bra014029.1-P | Field mustard | plasma membrane | 55.33 | 57.67 |
| KRH64701 | Soybean | plasma membrane | 43.91 | 47.66 |
| KRH19731 | Soybean | cytosol | 45.43 | 47.23 |
| KRH67559 | Soybean | plasma membrane | 45.18 | 47.21 |
| KRH18768 | Soybean | plasma membrane | 21.57 | 46.96 |
| KRH16366 | Soybean | plasma membrane | 42.89 | 46.56 |
| KRH16311 | Soybean | extracellular, golgi, plasma membrane | 40.61 | 46.51 |
| KRH53219 | Soybean | cytosol, golgi, plasma membrane, plastid | 43.91 | 46.51 |
| KRH18709 | Soybean | golgi, plasma membrane, plastid | 42.64 | 46.41 |
| KRH66689 | Soybean | plasma membrane | 46.19 | 46.31 |
| KRG95046 | Soybean | plasma membrane | 45.94 | 46.17 |
| KRG95827 | Soybean | plasma membrane | 44.67 | 45.95 |
| KRH32320 | Soybean | plasma membrane | 43.91 | 45.65 |
| KRH05131 | Soybean | endoplasmic reticulum, plasma membrane | 21.07 | 45.6 |
| KRH64703 | Soybean | plasma membrane | 45.18 | 44.84 |
| KRH53221 | Soybean | plasma membrane | 41.12 | 44.75 |
| KRH53217 | Soybean | plasma membrane | 44.42 | 44.64 |
| KRH53222 | Soybean | plasma membrane | 41.12 | 44.38 |
| KRH53218 | Soybean | plasma membrane | 30.71 | 43.37 |
| KRH16313 | Soybean | golgi, plasma membrane, vacuole | 43.4 | 43.29 |
| KRH53220 | Soybean | plasma membrane | 39.59 | 42.74 |
| KRH62737 | Soybean | plasma membrane | 43.15 | 42.71 |
| KRH64700 | Soybean | plasma membrane | 39.59 | 42.62 |
| KRH56218 | Soybean | plasma membrane | 41.62 | 41.41 |
| KRH20615 | Soybean | plasma membrane | 42.64 | 41.08 |
| KRH13279 | Soybean | plasma membrane | 42.64 | 41.08 |
| KRH34496 | Soybean | plasma membrane | 32.99 | 36.72 |
| KRH64698 | Soybean | plasma membrane | 36.04 | 36.04 |
| KRH34492 | Soybean | plasma membrane | 26.9 | 35.81 |
| KRH39121 | Soybean | plasma membrane | 32.49 | 35.65 |
| KRG92304 | Soybean | plasma membrane | 19.04 | 35.38 |
| KRH48595 | Soybean | endoplasmic reticulum, plasma membrane | 31.98 | 35.1 |
| KRH34491 | Soybean | plasma membrane | 24.87 | 33.91 |
| KRH61091 | Soybean | plasma membrane | 32.99 | 33.51 |
| KRH51770 | Soybean | plasma membrane | 32.49 | 32.9 |
| KRH05893 | Soybean | plasma membrane | 32.74 | 32.74 |
| KRH17381 | Soybean | plasma membrane | 31.98 | 32.39 |
| KRH19541 | Soybean | plasma membrane | 29.7 | 31.62 |
| KRH32169 | Soybean | plasma membrane | 17.01 | 30.32 |
| KRH28984 | Soybean | plasma membrane | 27.16 | 29.56 |
| KRH28737 | Soybean | plasma membrane | 27.16 | 29.56 |
| KRH28985 | Soybean | plasma membrane | 27.41 | 27.76 |
| KRH28983 | Soybean | plasma membrane | 26.9 | 27.18 |
| KRH76726 | Soybean | plasma membrane | 21.32 | 26.67 |
| KRH07254 | Soybean | plasma membrane | 25.63 | 26.1 |
| KRH07780 | Soybean | golgi, plasma membrane, plastid | 25.63 | 26.03 |
Protein Annotations
| EntrezGene:100811114 | MapMan:24.2.1.5 | EMBL:ACUP02002770 | EMBL:BT095132 | UniProt:C6TC53 | InterPro:EamA_dom |
| EnsemblPlantsGene:GLYMA_04G250600 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 | GO:GO:0055085 | GO:GO:0080144 | EnsemblPlants:KRH64697 |
| ProteinID:KRH64697 | ProteinID:KRH64697.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF138 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0001B15F4A | InterPro:WAT1-related | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:51706749..51711304
Molecular Weight (calculated)
43154.3 Da
IEP (calculated)
9.603
GRAVY (calculated)
0.402
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQNGSGKL SQGLRKVKPY LAILSLQFGY SGMYIITMVS FKHGMSHWIL SVYRHVVAAI IIVPFALVLE RKIRPKMTLP IFLRIVALGF LEPVLDQNLY
101: NMGMKMTSTT FASATVNVLP AITFVMALVF RLEKVNLRKF HSVAKVIGTV ITVSGAMVMT LYKGPAFQII KGGGAMSHHS NSSSTSTTEP SDQHWIVGTV
201: YLISSCASWA GFFILQSFTL KKYPAELSLT AWICVMGIIE GSIASFIFER DFSVWAIGWD SRLLACVYSG VICSGMAYYV QGVVTRERGP VFVTSFSPLC
301: MIITAALGSL VLAEQVHLGS IFGAILIVCG LYTVVWGKSK DRKSTREIEK GESRELPIKD GTKSASDIYE GIEINVPAEV LKKGEGKNVP PTTS
101: NMGMKMTSTT FASATVNVLP AITFVMALVF RLEKVNLRKF HSVAKVIGTV ITVSGAMVMT LYKGPAFQII KGGGAMSHHS NSSSTSTTEP SDQHWIVGTV
201: YLISSCASWA GFFILQSFTL KKYPAELSLT AWICVMGIIE GSIASFIFER DFSVWAIGWD SRLLACVYSG VICSGMAYYV QGVVTRERGP VFVTSFSPLC
301: MIITAALGSL VLAEQVHLGS IFGAILIVCG LYTVVWGKSK DRKSTREIEK GESRELPIKD GTKSASDIYE GIEINVPAEV LKKGEGKNVP PTTS
001: MKGGKMDKLK PIIAIISLQF GYAGMYIITM VSFKHGMNHW ILATYRHVVA TIVIAPFALI LERKIRPKMT WPLFLRILAL GFLEPLLDQN LYYIGMKATS
101: ATYSSAFVNA LPAITFIMAV IFRIETVNLK KTRSLAKVIG TAITVGGAMV MTLYKGPAIE LFKTAHSSLH GGSSGTSSET TDQNWVTGTL AVMGSITTWA
201: GFFILQSFTL KKYPAELSLV MWICAMGTVL NTIASLIMVR DVSAWKVGMD SGTLAAVYSG VVCSGMAYYI QSIVIRERGP VFTTSFSPMC MIITAFLGVL
301: VLAEKIHLGS IIGAIFIVFG LYSVVWGKAK DEVISVEEKI GMQELPITNT STKVEGGGIT SEVNEGVTNN TQV
101: ATYSSAFVNA LPAITFIMAV IFRIETVNLK KTRSLAKVIG TAITVGGAMV MTLYKGPAIE LFKTAHSSLH GGSSGTSSET TDQNWVTGTL AVMGSITTWA
201: GFFILQSFTL KKYPAELSLV MWICAMGTVL NTIASLIMVR DVSAWKVGMD SGTLAAVYSG VVCSGMAYYI QSIVIRERGP VFTTSFSPMC MIITAFLGVL
301: VLAEKIHLGS IIGAIFIVFG LYSVVWGKAK DEVISVEEKI GMQELPITNT STKVEGGGIT SEVNEGVTNN TQV
Arabidopsis Description
WAT1-related protein At4g08300 [Source:UniProtKB/Swiss-Prot;Acc:Q501F8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.