Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G75500.1 | KRH65384 | AT3G60600.1 | 21798944 |
| AT1G75500.1 | KRH76164 | AT3G60600.1 | 21798944 |
| AT1G75500.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT1G75500.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61091 | Soybean | plasma membrane | 96.4 | 96.65 |
| KRH17381 | Soybean | plasma membrane | 85.09 | 85.09 |
| KRH05893 | Soybean | plasma membrane | 85.09 | 84.01 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 82.52 | 83.81 |
| Bra008201.1-P | Field mustard | plasma membrane | 78.66 | 78.46 |
| AT1G75500.1 | Thale cress | plasma membrane | 77.38 | 77.38 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 76.35 | 77.14 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 76.86 | 77.06 |
| CDX85897 | Canola | plasma membrane | 76.86 | 77.06 |
| Bra003751.1-P | Field mustard | plasma membrane | 76.35 | 76.94 |
| Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 76.61 | 76.8 |
| CDX68127 | Canola | plasma membrane | 76.09 | 76.68 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 63.24 | 76.64 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 76.35 | 76.55 |
| CDY20378 | Canola | plasma membrane | 75.58 | 76.17 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 77.12 | 75.95 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 64.27 | 75.53 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 75.06 | 75.45 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 59.64 | 75.08 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 71.21 | 72.32 |
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 72.24 | 71.68 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 71.47 | 71.65 |
| Os08t0561500-01 | Rice | plasma membrane | 70.69 | 71.06 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 71.21 | 71.03 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 71.21 | 70.84 |
| EES15167 | Sorghum | plasma membrane | 72.75 | 70.57 |
| Zm00001d031913_P003 | Maize | plasma membrane | 72.24 | 69.21 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 60.93 | 68.9 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 53.21 | 66.56 |
| KRH48595 | Soybean | endoplasmic reticulum, plasma membrane | 52.96 | 57.38 |
| KRH39121 | Soybean | plasma membrane | 52.7 | 57.1 |
| KRH28737 | Soybean | plasma membrane | 52.19 | 56.08 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 57.07 | 52.73 |
| KRH76726 | Soybean | plasma membrane | 41.9 | 51.75 |
| KRH18768 | Soybean | plasma membrane | 17.99 | 38.67 |
| KRH28983 | Soybean | plasma membrane | 37.53 | 37.44 |
| KRH34491 | Soybean | plasma membrane | 27.76 | 37.37 |
| KRH28984 | Soybean | plasma membrane | 34.19 | 36.74 |
| KRH64701 | Soybean | plasma membrane | 34.19 | 36.64 |
| KRH16311 | Soybean | extracellular, golgi, plasma membrane | 32.13 | 36.34 |
| KRH28985 | Soybean | plasma membrane | 35.73 | 35.73 |
| KRH16366 | Soybean | plasma membrane | 33.16 | 35.54 |
| KRH18709 | Soybean | golgi, plasma membrane, plastid | 32.9 | 35.36 |
| KRH34496 | Soybean | plasma membrane | 32.13 | 35.31 |
| KRH05131 | Soybean | endoplasmic reticulum, plasma membrane | 16.45 | 35.16 |
| KRH67559 | Soybean | plasma membrane | 33.93 | 35.01 |
| KRG95827 | Soybean | plasma membrane | 34.45 | 34.99 |
| KRG95046 | Soybean | plasma membrane | 34.96 | 34.69 |
| KRH16315 | Soybean | golgi, nucleus, plastid | 34.45 | 34.63 |
| KRH07254 | Soybean | plasma membrane | 34.45 | 34.63 |
| KRH18766 | Soybean | golgi, nucleus, plasma membrane | 34.45 | 34.45 |
| KRH66689 | Soybean | plasma membrane | 34.7 | 34.35 |
| KRH56218 | Soybean | plasma membrane | 34.96 | 34.34 |
| KRH07780 | Soybean | golgi, plasma membrane, plastid | 34.19 | 34.28 |
| KRH62737 | Soybean | plasma membrane | 34.96 | 34.17 |
| KRH53220 | Soybean | plasma membrane | 31.88 | 33.97 |
| KRH53222 | Soybean | plasma membrane | 31.88 | 33.97 |
| KRH34492 | Soybean | plasma membrane | 25.71 | 33.78 |
| KRH64700 | Soybean | plasma membrane | 31.62 | 33.61 |
| KRH19731 | Soybean | cytosol | 32.65 | 33.51 |
| KRH53221 | Soybean | plasma membrane | 31.11 | 33.43 |
| KRH20615 | Soybean | plasma membrane | 34.96 | 33.25 |
| KRH53223 | Soybean | golgi, nucleus, plasma membrane | 33.93 | 33.08 |
| KRH13279 | Soybean | plasma membrane | 34.7 | 33.01 |
| KRH53219 | Soybean | cytosol, golgi, plasma membrane, plastid | 31.36 | 32.8 |
| KRH64697 | Soybean | golgi, nucleus, plasma membrane | 32.9 | 32.49 |
| KRH32320 | Soybean | plasma membrane | 31.62 | 32.45 |
| KRH16313 | Soybean | golgi, plasma membrane, vacuole | 32.9 | 32.41 |
| KRH53218 | Soybean | plasma membrane | 23.14 | 32.26 |
| KRG92304 | Soybean | plasma membrane | 17.48 | 32.08 |
| KRH19541 | Soybean | plasma membrane | 29.82 | 31.35 |
| KRH53217 | Soybean | plasma membrane | 31.36 | 31.12 |
| KRH64703 | Soybean | plasma membrane | 31.62 | 30.98 |
| KRH32169 | Soybean | plasma membrane | 16.97 | 29.86 |
| KRH64698 | Soybean | plasma membrane | 27.76 | 27.41 |
Protein Annotations
| EntrezGene:100786714 | MapMan:24.2.1.5 | UniProt:A0A0R4J3F5 | EMBL:ACUP02003389 | InterPro:EamA_dom | EnsemblPlantsGene:GLYMA_06G028000 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlants:KRH51770 |
| ProteinID:KRH51770 | ProteinID:KRH51770.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI000189D588 | InterPro:WAT1-related | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:2183636..2186994
Molecular Weight (calculated)
42244.9 Da
IEP (calculated)
9.100
GRAVY (calculated)
0.587
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSASASAS SSRMWCSIPE RFQLHAAMLA LQFGYAGFHV VSRAALNMGI SKLVFPVYRN IIAFLLLVPF AYFLEKKERP AITLNFLLQF FLLALVGITA
101: NQGFYLLGLD NTSPTFASAI QNSVPAITFL MAVILRIEQV RLNRKDGISK VAGTIFCVAG ATVITLYKGP TIYSPTPPLH SERPAVVDFG TLSLGDAKGK
201: NWTLGCLYLI GHCLSWSAWL VLQAPVLKKY PARLSVTSYT CFFGLIQFLV IALIVERDAQ AWIFQSGGEV FTILYAGVVA SGIAFAVQIW CIDRGGPVFV
301: AVYQPVQTLV VAIMASIALG EEFYLGGIIG AVLIVVGLYF VLWGKSEERK FAKEHAAITS TPEHSGIRSS SHAKTSLTQP LLPSSTENV
101: NQGFYLLGLD NTSPTFASAI QNSVPAITFL MAVILRIEQV RLNRKDGISK VAGTIFCVAG ATVITLYKGP TIYSPTPPLH SERPAVVDFG TLSLGDAKGK
201: NWTLGCLYLI GHCLSWSAWL VLQAPVLKKY PARLSVTSYT CFFGLIQFLV IALIVERDAQ AWIFQSGGEV FTILYAGVVA SGIAFAVQIW CIDRGGPVFV
301: AVYQPVQTLV VAIMASIALG EEFYLGGIIG AVLIVVGLYF VLWGKSEERK FAKEHAAITS TPEHSGIRSS SHAKTSLTQP LLPSSTENV
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.