Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G75500.1 | KRH65384 | AT3G60600.1 | 21798944 |
AT1G75500.1 | KRH76164 | AT3G60600.1 | 21798944 |
AT1G75500.1 | KRH56393 | AT4G26455.1 | 21798944 |
AT1G75500.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH51770 | Soybean | plasma membrane | 96.65 | 96.4 |
KRH17381 | Soybean | plasma membrane | 85.31 | 85.09 |
VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 82.99 | 84.07 |
KRH05893 | Soybean | plasma membrane | 85.05 | 83.76 |
Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 76.8 | 77.4 |
Bra008201.1-P | Field mustard | plasma membrane | 77.32 | 76.92 |
AT1G75500.1 | Thale cress | plasma membrane | 76.8 | 76.61 |
GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 63.14 | 76.32 |
PGSC0003DMT400009630 | Potato | plasma membrane | 77.58 | 76.2 |
CDY64209 | Canola | golgi, plasma membrane, vacuole | 76.03 | 76.03 |
CDX85897 | Canola | plasma membrane | 76.03 | 76.03 |
Bra003751.1-P | Field mustard | plasma membrane | 75.52 | 75.91 |
Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 75.77 | 75.77 |
GSMUA_AchrUn_... | Banana | plasma membrane | 75.52 | 75.71 |
CDX68127 | Canola | plasma membrane | 75.26 | 75.65 |
CDY47518 | Canola | golgi, plasma membrane, vacuole | 75.52 | 75.52 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 64.18 | 75.23 |
CDY39037 | Canola | golgi, plasma membrane, vacuole | 59.54 | 74.76 |
CDY20378 | Canola | plasma membrane | 74.23 | 74.61 |
TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 71.39 | 72.32 |
Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 72.68 | 71.94 |
TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 71.39 | 71.39 |
EES15167 | Sorghum | plasma membrane | 73.71 | 71.32 |
Os08t0561500-01 | Rice | plasma membrane | 71.13 | 71.32 |
TraesCS3B01G006900.1 | Wheat | plasma membrane | 71.13 | 70.77 |
TraesCS3B01G011600.1 | Wheat | plasma membrane | 71.13 | 70.59 |
Zm00001d031913_P003 | Maize | plasma membrane | 72.68 | 69.46 |
TraesCS7D01G280200.1 | Wheat | plasma membrane | 60.31 | 68.02 |
TraesCS7A01G281700.1 | Wheat | plasma membrane | 53.09 | 66.24 |
KRH48595 | Soybean | endoplasmic reticulum, plasma membrane | 53.87 | 58.22 |
KRH39121 | Soybean | plasma membrane | 53.61 | 57.94 |
KRH28737 | Soybean | plasma membrane | 52.32 | 56.08 |
HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 56.96 | 52.49 |
KRH76726 | Soybean | plasma membrane | 41.75 | 51.43 |
KRH18768 | Soybean | plasma membrane | 18.04 | 38.67 |
KRH34491 | Soybean | plasma membrane | 28.09 | 37.72 |
KRH28983 | Soybean | plasma membrane | 37.63 | 37.44 |
KRH64701 | Soybean | plasma membrane | 34.54 | 36.91 |
KRH28984 | Soybean | plasma membrane | 34.28 | 36.74 |
KRH16311 | Soybean | extracellular, golgi, plasma membrane | 32.47 | 36.63 |
KRH16366 | Soybean | plasma membrane | 34.02 | 36.36 |
KRH18709 | Soybean | golgi, plasma membrane, plastid | 33.51 | 35.91 |
KRH28985 | Soybean | plasma membrane | 35.82 | 35.73 |
KRH34496 | Soybean | plasma membrane | 32.47 | 35.59 |
KRG95046 | Soybean | plasma membrane | 35.57 | 35.2 |
KRH05131 | Soybean | endoplasmic reticulum, plasma membrane | 16.49 | 35.16 |
KRH66689 | Soybean | plasma membrane | 35.31 | 34.86 |
KRH67559 | Soybean | plasma membrane | 33.76 | 34.75 |
KRG95827 | Soybean | plasma membrane | 34.28 | 34.73 |
KRH07254 | Soybean | plasma membrane | 34.54 | 34.63 |
KRH16315 | Soybean | golgi, nucleus, plastid | 34.54 | 34.63 |
KRH18766 | Soybean | golgi, nucleus, plasma membrane | 34.54 | 34.45 |
KRH56218 | Soybean | plasma membrane | 35.05 | 34.34 |
KRH07780 | Soybean | golgi, plasma membrane, plastid | 34.28 | 34.28 |
KRH19731 | Soybean | cytosol | 33.25 | 34.04 |
KRH53220 | Soybean | plasma membrane | 31.96 | 33.97 |
KRH53222 | Soybean | plasma membrane | 31.96 | 33.97 |
KRH62737 | Soybean | plasma membrane | 34.79 | 33.92 |
KRH64700 | Soybean | plasma membrane | 31.7 | 33.61 |
KRH53219 | Soybean | cytosol, golgi, plasma membrane, plastid | 32.22 | 33.6 |
KRH53223 | Soybean | golgi, nucleus, plasma membrane | 34.54 | 33.58 |
KRH34492 | Soybean | plasma membrane | 25.52 | 33.45 |
KRH53221 | Soybean | plasma membrane | 31.19 | 33.43 |
KRH20615 | Soybean | plasma membrane | 35.05 | 33.25 |
KRH13279 | Soybean | plasma membrane | 34.79 | 33.01 |
KRH64697 | Soybean | golgi, nucleus, plasma membrane | 33.51 | 32.99 |
KRH32320 | Soybean | plasma membrane | 31.96 | 32.72 |
KRH53218 | Soybean | plasma membrane | 23.45 | 32.62 |
KRG92304 | Soybean | plasma membrane | 17.78 | 32.55 |
KRH16313 | Soybean | golgi, plasma membrane, vacuole | 32.73 | 32.15 |
KRH53217 | Soybean | plasma membrane | 32.22 | 31.89 |
KRH19541 | Soybean | plasma membrane | 30.15 | 31.62 |
KRH64703 | Soybean | plasma membrane | 32.22 | 31.49 |
KRH32169 | Soybean | plasma membrane | 17.53 | 30.77 |
KRH64698 | Soybean | plasma membrane | 27.84 | 27.41 |
Protein Annotations
EntrezGene:100798686 | MapMan:24.2.1.5 | EMBL:ACUP02002155 | InterPro:EamA_dom | EnsemblPlantsGene:GLYMA_04G027800 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | UniProt:I1JT68 | EnsemblPlants:KRH61091 |
ProteinID:KRH61091 | ProteinID:KRH61091.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | SUPFAM:SSF103481 |
TMHMM:TMhelix | UniParc:UPI0002339C5D | InterPro:WAT1-related | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:2286032..2289470
Molecular Weight (calculated)
42075.8 Da
IEP (calculated)
8.921
GRAVY (calculated)
0.615
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSGSASSS RMWCSIPERV QLHAAMLALQ FGYAGFHVVS RAALNMGISK LVFPVYRNII AFLLLLPFAY FLEKKERPAI TLNFLLQFFL LALVGITANQ
101: GFYLLGLDNT SPTFASAIQN SVPAITFLMA VILRIEQVRL NRKDGIAKVA GTIFCVAGAT VITLYKGPTI YSPSPPLQSE SSVVVEFGTL SSLGDAKGKN
201: WTLGCLYLIG HCLSWSAWLV LQAPVLKKYP ARLSVTSYTC FFGLIQFLVI ALIVERDAQA WIFQSGGEVF TILYAGVVAS GIAFAVQIWC IDRGGPVFVA
301: VYQPVQTLVV AIMASLALGE EFYLGGIIGA VLIVVGLYFV LWGKSEERKF AKEHAAITST PEHSGIRSSS HAKTLLTQPL LPSSTENV
101: GFYLLGLDNT SPTFASAIQN SVPAITFLMA VILRIEQVRL NRKDGIAKVA GTIFCVAGAT VITLYKGPTI YSPSPPLQSE SSVVVEFGTL SSLGDAKGKN
201: WTLGCLYLIG HCLSWSAWLV LQAPVLKKYP ARLSVTSYTC FFGLIQFLVI ALIVERDAQA WIFQSGGEVF TILYAGVVAS GIAFAVQIWC IDRGGPVFVA
301: VYQPVQTLVV AIMASLALGE EFYLGGIIGA VLIVVGLYFV LWGKSEERKF AKEHAAITST PEHSGIRSSS HAKTLLTQPL LPSSTENV
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.