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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • golgi 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003423.1-P
Bra007547.1-P
Bra014481.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75500.1 Bra003423.1-P AT3G60600.1 21798944
AT1G75500.1 Bra007547.1-P AT3G60600.1 21798944
AT1G75500.1 Bra014481.1-P AT3G60600.1 21798944
AT1G75500.1 Bra026434.1-P AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47518 Canola golgi, plasma membrane, vacuole 99.74 99.74
CDY64209 Canola golgi, plasma membrane, vacuole 99.23 99.23
Bra003751.1-P Field mustard plasma membrane 95.36 95.85
AT1G75500.1 Thale cress plasma membrane 95.62 95.37
Bra008201.1-P Field mustard plasma membrane 94.33 93.85
VIT_18s0001g13360.t01 Wine grape plasma membrane 75.77 76.76
KRH51770 Soybean plasma membrane 76.8 76.61
KRH61091 Soybean plasma membrane 75.77 75.77
KRH17381 Soybean plasma membrane 75.0 74.81
GSMUA_Achr1P06750_001 Banana golgi, plasma membrane, vacuole 61.86 74.77
Solyc04g080940.2.1 Tomato extracellular, plasma membrane 73.2 73.77
KRH05893 Soybean plasma membrane 74.48 73.35
GSMUA_AchrUn_... Banana plasma membrane 72.94 73.13
GSMUA_AchrUn_... Banana golgi, plasma membrane, vacuole 62.37 73.11
PGSC0003DMT400009630 Potato plasma membrane 73.71 72.41
TraesCS3A01G007100.1 Wheat golgi, plasma membrane, vacuole 71.13 72.06
TraesCS3D01G003600.1 Wheat golgi, plasma membrane, vacuole 71.39 71.39
TraesCS3B01G006900.1 Wheat plasma membrane 71.39 71.03
Zm00001d049916_P001 Maize golgi, plasma membrane, vacuole 71.39 70.66
TraesCS3B01G011600.1 Wheat plasma membrane 70.62 70.08
Os08t0561500-01 Rice plasma membrane 69.59 69.77
EES15167 Sorghum plasma membrane 71.39 69.08
TraesCS7D01G280200.1 Wheat plasma membrane 60.31 68.02
Zm00001d031913_P003 Maize plasma membrane 70.1 67.0
TraesCS7A01G281700.1 Wheat plasma membrane 52.06 64.95
Bra001699.1-P Field mustard plasma membrane 52.58 58.12
Bra018748.1-P Field mustard plasma membrane 53.87 58.06
Bra021301.1-P Field mustard plasma membrane 52.84 56.94
HORVU3Hr1G001040.3 Barley golgi, peroxisome 57.99 53.44
Bra012063.1-P Field mustard plasma membrane 51.29 53.21
Bra038272.1-P Field mustard plasma membrane 33.25 34.58
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 32.22 34.53
Bra009296.1-P Field mustard plasma membrane 35.05 34.09
Bra005033.1-P Field mustard plasma membrane 32.47 33.6
Bra017068.1-P Field mustard plasma membrane 32.22 33.33
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 34.02 33.17
Bra027605.1-P Field mustard plasma membrane 32.22 32.64
Bra023428.1-P Field mustard plasma membrane 31.7 32.45
Bra017186.1-P Field mustard plasma membrane 30.93 32.43
Bra027604.1-P Field mustard plasma membrane 31.7 32.03
Bra008810.1-P Field mustard plasma membrane 29.38 31.93
Bra005193.1-P Field mustard plasma membrane 30.93 31.58
Bra010143.1-P Field mustard golgi, plasma membrane 28.35 31.25
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 33.25 31.23
Bra004592.1-P Field mustard plasma membrane 31.44 30.96
Bra016963.1-P Field mustard plasma membrane 30.67 30.75
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.64 30.75
Bra012297.1-P Field mustard plasma membrane 28.09 30.03
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 28.87 30.03
Bra000212.1-P Field mustard plasma membrane 30.41 30.03
Bra014682.1-P Field mustard plasma membrane 28.61 29.84
Bra007258.1-P Field mustard plasma membrane 28.61 29.44
Bra014029.1-P Field mustard plasma membrane 28.35 29.1
Bra003245.1-P Field mustard plasma membrane 27.84 28.8
Bra040619.1-P Field mustard plasma membrane 28.09 28.53
Protein Annotations
EnsemblPlants:Bra015839.1EnsemblPlants:Bra015839.1-PEnsemblPlantsGene:Bra015839GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF53PFAM:PF00892SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002541F7DUniProt:M4DH62MapMan:24.2.1.5:
Description
AT1G75500 (E=1e-198) | nodulin MtN21 family protein
Coordinates
chrA07:-:20579964..20581788
Molecular Weight (calculated)
42321.1 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.600
Length
388 amino acids
Sequence
(BLAST)
001: MSDNTDNRRA IWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDYTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKVLGT ALCVAGASVI TLYKGPTIYT PTSNLHAHLL TTNSAASAVL APLGDAAPKN
201: WTLGCIYLIG HCLSWSGWLV FQAPVLKSYP ARLSVTSYTL LFGIIQFVII AAFCERDSQA WVFHSGWELF TILYAGIVAS GIAFAVQIWC IDRGGPVFVA
301: VYQPVQTLVV AIMASIALGE EFYLGGIIGA VLIIAGLYFV LYGKSEERKF AALEKAAIQS SAEHGIERAP ISRGSITTPL LHQSTSNV
Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.