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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49560 Canola golgi, plasma membrane, vacuole 99.73 99.73
CDY63388 Canola golgi, plasma membrane, vacuole 99.46 99.46
AT4G08300.1 Thale cress plasma membrane 88.74 88.74
Bra014029.1-P Field mustard plasma membrane 76.94 75.93
Bra040619.1-P Field mustard plasma membrane 76.41 74.61
KRH64697 Soybean golgi, nucleus, plasma membrane 62.73 59.39
KRH53223 Soybean golgi, nucleus, plasma membrane 63.27 59.15
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 61.13 58.31
KRH16315 Soybean golgi, nucleus, plastid 59.79 57.62
KRH18766 Soybean golgi, nucleus, plasma membrane 59.52 57.07
PGSC0003DMT400002407 Potato golgi, plasma membrane 55.23 55.98
Bra012297.1-P Field mustard plasma membrane 54.16 55.65
Solyc11g012930.1.1 Tomato golgi, plasma membrane 54.69 55.28
Bra005033.1-P Field mustard plasma membrane 46.92 46.67
Bra017068.1-P Field mustard plasma membrane 46.65 46.4
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 43.16 44.48
Bra017186.1-P Field mustard plasma membrane 43.16 43.51
Bra005193.1-P Field mustard plasma membrane 44.24 43.42
Bra010143.1-P Field mustard golgi, plasma membrane 40.75 43.18
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.82 41.71
Bra009296.1-P Field mustard plasma membrane 43.43 40.6
Bra008810.1-P Field mustard plasma membrane 36.73 38.38
Bra003245.1-P Field mustard plasma membrane 38.34 38.13
Bra023428.1-P Field mustard plasma membrane 38.34 37.73
Bra014682.1-P Field mustard plasma membrane 37.53 37.63
Bra007258.1-P Field mustard plasma membrane 37.27 36.87
Bra004592.1-P Field mustard plasma membrane 38.61 36.55
Bra016963.1-P Field mustard plasma membrane 37.8 36.43
Bra000212.1-P Field mustard plasma membrane 37.8 35.88
Bra001699.1-P Field mustard plasma membrane 32.44 34.47
Bra021301.1-P Field mustard plasma membrane 31.9 33.06
Bra018748.1-P Field mustard plasma membrane 31.64 32.78
Bra012063.1-P Field mustard plasma membrane 32.17 32.09
Bra008201.1-P Field mustard plasma membrane 31.37 30.0
Bra003751.1-P Field mustard plasma membrane 30.56 29.53
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 30.03 28.87
Bra027604.1-P Field mustard plasma membrane 28.42 27.6
Bra038272.1-P Field mustard plasma membrane 27.35 27.35
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 28.42 26.63
Bra027605.1-P Field mustard plasma membrane 27.08 26.37
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 28.15 25.42
Protein Annotations
EnsemblPlants:Bra010139.1EnsemblPlants:Bra010139.1-PEnsemblPlantsGene:Bra010139GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF12PFAM:PF00892SUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI000253F76CUniProt:M4D0Z0MapMan:24.2.1.5::
Description
AT4G08300 (E=4e-184) | nodulin MtN21 family protein
Coordinates
chrA06:-:19711153..19714461
Molecular Weight (calculated)
40360.4 Da
IEP (calculated)
9.821
GRAVY (calculated)
0.561
Length
373 amino acids
Sequence
(BLAST)
001: MKGGEKQCGK VDKLKPIIAI ISLQFGYAGM YIITMVSFKH GMNHWVLATY RHVVATIVMA PFALILERKI RPKMTWPLFL RILALGILEP LMDQNFYYIG
101: MKATSATYSS AFVNALPAVT FIMAVIFRLE TVNLKKIRSL AKVIGTAITV GGAMVMTLYK GPAIELIKAA HTSIHGGSSS ETTDQHWVTG TLAVMGSIIS
201: WAGFFILQSF TLKKYPAELS LVMWICGMGT ILNTAASLVM VRDLSAWKIG MDSGTLAAVY SGVVCSGMAY YIQSIVIRER GPVFTTSFSP MCMIITAFLG
301: ALVLAEKIHL GSIIGAVFIV FGLYSVVWGK AKDEVISTTE EKIGMQELPI TSIISTDGGG NPGAHNKGVT NST
Best Arabidopsis Sequence Match ( AT4G08300.1 )
(BLAST)
001: MKGGKMDKLK PIIAIISLQF GYAGMYIITM VSFKHGMNHW ILATYRHVVA TIVIAPFALI LERKIRPKMT WPLFLRILAL GFLEPLLDQN LYYIGMKATS
101: ATYSSAFVNA LPAITFIMAV IFRIETVNLK KTRSLAKVIG TAITVGGAMV MTLYKGPAIE LFKTAHSSLH GGSSGTSSET TDQNWVTGTL AVMGSITTWA
201: GFFILQSFTL KKYPAELSLV MWICAMGTVL NTIASLIMVR DVSAWKVGMD SGTLAAVYSG VVCSGMAYYI QSIVIRERGP VFTTSFSPMC MIITAFLGVL
301: VLAEKIHLGS IIGAIFIVFG LYSVVWGKAK DEVISVEEKI GMQELPITNT STKVEGGGIT SEVNEGVTNN TQV
Arabidopsis Description
WAT1-related protein At4g08300 [Source:UniProtKB/Swiss-Prot;Acc:Q501F8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.