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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 7
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76001 Canola plasma membrane 99.19 99.19
AT3G56620.1 Thale cress plasma membrane 85.48 84.35
Bra003245.1-P Field mustard plasma membrane 84.95 84.27
Bra007258.1-P Field mustard plasma membrane 85.22 84.08
Bra004592.1-P Field mustard plasma membrane 70.16 66.24
Bra016963.1-P Field mustard plasma membrane 68.01 65.37
Bra000212.1-P Field mustard plasma membrane 68.01 64.38
Bra009296.1-P Field mustard plasma membrane 47.31 44.11
Bra017186.1-P Field mustard plasma membrane 41.13 41.35
Bra012297.1-P Field mustard plasma membrane 39.78 40.77
Bra017068.1-P Field mustard plasma membrane 40.86 40.53
Bra005033.1-P Field mustard plasma membrane 40.86 40.53
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 38.98 40.06
Bra005193.1-P Field mustard plasma membrane 40.59 39.74
Bra008810.1-P Field mustard plasma membrane 36.29 37.82
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 37.63 37.53
Bra014029.1-P Field mustard plasma membrane 37.37 36.77
Bra010143.1-P Field mustard golgi, plasma membrane 34.68 36.65
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 36.29 36.1
Bra023428.1-P Field mustard plasma membrane 36.29 35.62
Bra040619.1-P Field mustard plasma membrane 36.56 35.6
Bra001699.1-P Field mustard plasma membrane 31.18 33.05
Bra018748.1-P Field mustard plasma membrane 30.65 31.67
Bra021301.1-P Field mustard plasma membrane 30.65 31.67
Bra008201.1-P Field mustard plasma membrane 30.65 29.23
Bra003751.1-P Field mustard plasma membrane 30.11 29.02
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 29.84 28.61
Bra012063.1-P Field mustard plasma membrane 28.23 28.07
Bra038272.1-P Field mustard plasma membrane 26.08 26.01
Bra027604.1-P Field mustard plasma membrane 25.54 24.74
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 25.54 23.87
Bra027605.1-P Field mustard plasma membrane 24.19 23.5
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 25.0 22.52
Protein Annotations
EnsemblPlants:Bra014682.1EnsemblPlants:Bra014682.1-PEnsemblPlantsGene:Bra014682GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF9PFAM:PF00892SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002544781UniProt:M4DDW3MapMan:24.2.1.5:
Description
AT3G56620 (E=6e-145) | integral membrane family protein / nodulin MtN21-related
Coordinates
chrA04:+:2211501..2213228
Molecular Weight (calculated)
41203.5 Da
IEP (calculated)
8.337
GRAVY (calculated)
0.632
Length
372 amino acids
Sequence
(BLAST)
001: MSELAKPYFA MVCLQFGYAG MNLVTKVVLN GGMNHFVLVA YRNAFATAAI APFALLSERK VRPKMTFPIF MQIFLLAVLG PVIDQNMYYA GLRLTSPTFA
101: GAVTSIVPAL TFIISIIFRM EKVELRKVRF QAKVVGTLVI VVGAMLMILF KSPLINFLRS HLIREASSSA GEDYLRATVF LLIASFSWAS FFVLQAATLK
201: RYSSHLSLST MVCFMGTLQS TALAFVMEPN LSAWNIAFDM NLLASAYAGI MSSSIAYYVQ GMMTKQKSVV FVTAFNPLIV IIVSIINFLI LGQRLYLGGI
301: LGMMILMVGV CAVLWGKEGD EEEEENIEEK FVDVIKCCKD CGNNSLSMPR IDEEVDVEMQ STKKDKTVVD LL
Best Arabidopsis Sequence Match ( AT3G56620.1 )
(BLAST)
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Arabidopsis Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.