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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35431 Canola plasma membrane 99.75 99.75
CDY22493 Canola plasma membrane 49.62 94.66
Bra004592.1-P Field mustard plasma membrane 86.51 86.29
Bra016963.1-P Field mustard plasma membrane 83.97 85.27
AT2G40900.1 Thale cress plasma membrane 84.73 84.52
Bra007258.1-P Field mustard plasma membrane 65.9 68.7
Bra003245.1-P Field mustard plasma membrane 65.14 68.27
Bra014682.1-P Field mustard plasma membrane 64.38 68.01
Bra009296.1-P Field mustard plasma membrane 50.13 49.37
Bra005193.1-P Field mustard plasma membrane 41.22 42.63
Bra017186.1-P Field mustard plasma membrane 39.95 42.43
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 38.93 42.27
Bra012297.1-P Field mustard plasma membrane 38.17 41.32
Bra017068.1-P Field mustard plasma membrane 38.17 40.0
Bra005033.1-P Field mustard plasma membrane 37.91 39.73
Bra008810.1-P Field mustard plasma membrane 35.62 39.22
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 36.39 38.24
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 35.88 37.8
Bra014029.1-P Field mustard plasma membrane 36.13 37.57
Bra023428.1-P Field mustard plasma membrane 35.37 36.68
Bra040619.1-P Field mustard plasma membrane 35.37 36.39
Bra010143.1-P Field mustard golgi, plasma membrane 31.81 35.51
Bra001699.1-P Field mustard plasma membrane 30.79 34.47
Bra018748.1-P Field mustard plasma membrane 30.53 33.33
Bra021301.1-P Field mustard plasma membrane 30.28 33.06
Bra008201.1-P Field mustard plasma membrane 31.04 31.28
Bra003751.1-P Field mustard plasma membrane 30.28 30.83
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 30.03 30.41
Bra012063.1-P Field mustard plasma membrane 28.5 29.95
Bra038272.1-P Field mustard plasma membrane 24.17 25.47
Bra027605.1-P Field mustard plasma membrane 23.92 24.54
Bra027604.1-P Field mustard plasma membrane 23.92 24.48
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 24.17 23.87
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 23.16 22.03
Protein Annotations
EnsemblPlants:Bra000212.1EnsemblPlants:Bra000212.1-PEnsemblPlantsGene:Bra000212GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF9PFAM:PF00892SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000254033CUniProt:M4C7N4MapMan:24.2.1.5:
Description
AT2G40900 (E=1e-147) | nodulin MtN21 family protein
Coordinates
chrA03:-:9899431..9902408
Molecular Weight (calculated)
43295.6 Da
IEP (calculated)
9.055
GRAVY (calculated)
0.550
Length
393 amino acids
Sequence
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK AVLDRGMSHY VLVSYRNAFA TAAIAPFAFL SERKVRSKIT FPIFMHIFVL ALLGPVIDQN LYYIGLKLTF
101: PTFSSAVSNI VPAITFILAT LFRMEKVEMR KARCQVKVVG TLVTLVGSIL VILYKGPFIN FFRSHLSTTT SSPLAGNYLK ATAFLLVASL SWASFFILQA
201: STLKKYSAHL SLSTMVCFMG TLQSLALTFV MEHNPSALSI GLDMNLLASA YAGIMSSSIA YYVQGLMMQR KGPVFVTAFN PLVFVIVSIM SFFVLEQGIY
301: LGGVLGVVVL TVGVYAVLWG KHVDDISEEL YREDNTVLEA VKCCSRNSGL SIMPKIKEPD EDVETGKFQA TEKESSLAVM VFCSENVNND SRF
Best Arabidopsis Sequence Match ( AT2G40900.1 )
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRSKMT FPIFMRIFLL ALLGPVIDQN LYYIGLKLTS
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
Arabidopsis Description
WAT1-related protein At2g40900 [Source:UniProtKB/Swiss-Prot;Acc:F4IJ08]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.