Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • plasma membrane 5
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G44800.1 Bra026434.1-P AT4G26455.1 21798944
AT1G44800.1 Bra002403.1-P AT5G22290.1 21798944
AT1G44800.1 Bra006619.1-P AT5G22290.1 21798944
AT1G44800.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14996 Canola plasma membrane 99.48 99.48
Bra014029.1-P Field mustard plasma membrane 90.58 91.53
AT1G44800.1 Thale cress plasma membrane 85.34 88.11
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 74.61 76.41
KRH64697 Soybean golgi, nucleus, plasma membrane 58.64 56.85
KRH53223 Soybean golgi, nucleus, plasma membrane 58.64 56.14
KRH16315 Soybean golgi, nucleus, plastid 56.54 55.81
KRH18766 Soybean golgi, nucleus, plasma membrane 56.81 55.78
PGSC0003DMT400002407 Potato golgi, plasma membrane 53.4 55.43
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 56.54 55.24
Solyc11g012930.1.1 Tomato golgi, plasma membrane 52.88 54.74
Bra012297.1-P Field mustard plasma membrane 51.31 53.99
Bra005033.1-P Field mustard plasma membrane 47.38 48.27
Bra017068.1-P Field mustard plasma membrane 47.38 48.27
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 40.05 42.27
Bra010143.1-P Field mustard golgi, plasma membrane 38.48 41.76
Bra009296.1-P Field mustard plasma membrane 43.46 41.6
Bra017186.1-P Field mustard plasma membrane 39.01 40.27
Bra005193.1-P Field mustard plasma membrane 39.01 39.21
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 37.43 38.24
Bra008810.1-P Field mustard plasma membrane 35.6 38.1
Bra003245.1-P Field mustard plasma membrane 36.91 37.6
Bra023428.1-P Field mustard plasma membrane 36.39 36.68
Bra014682.1-P Field mustard plasma membrane 35.6 36.56
Bra007258.1-P Field mustard plasma membrane 35.6 36.07
Bra000212.1-P Field mustard plasma membrane 36.39 35.37
Bra016963.1-P Field mustard plasma membrane 35.6 35.14
Bra004592.1-P Field mustard plasma membrane 35.86 34.77
Bra001699.1-P Field mustard plasma membrane 29.58 32.19
Bra018748.1-P Field mustard plasma membrane 29.58 31.39
Bra012063.1-P Field mustard plasma membrane 30.37 31.02
Bra021301.1-P Field mustard plasma membrane 29.06 30.83
Bra008201.1-P Field mustard plasma membrane 29.84 29.23
Bra003751.1-P Field mustard plasma membrane 29.06 28.76
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 28.53 28.09
Bra038272.1-P Field mustard plasma membrane 25.65 26.27
Bra027604.1-P Field mustard plasma membrane 26.18 26.04
Bra027605.1-P Field mustard plasma membrane 25.39 25.33
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 26.18 25.13
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 25.39 23.49
Protein Annotations
EnsemblPlants:Bra040619.1EnsemblPlants:Bra040619.1-PEnsemblPlantsGene:Bra040619GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF12PFAM:PF00892SUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI000253E6E6UniProt:M4FHP1MapMan:24.2.1.5::
Description
AT1G44800 (E=6e-181) | nodulin MtN21 family protein
Coordinates
chrScaffold000224:-:31102..33645
Molecular Weight (calculated)
41028.1 Da
IEP (calculated)
9.815
GRAVY (calculated)
0.659
Length
382 amino acids
Sequence
(BLAST)
001: MKGGGSNCGS LEKIKPILAI ISLQFGYAGM YIITMVSFKH GMDHWVLATY RHIVATLVMA PFALVFERKI RPKMTLPIFY RLLALGILEP LMDQNFYYIG
101: LKSTSASYTS AFTNALPAVT FILALIFRLE TVNFRKIHSV AKVVGTVITL AGAMVMTLYK GPAIEIVKAA HSSFHGGSNT ATGQHWVTGT LAIMGSISTW
201: AAFFILQSFT LKIYPAELSL VALICGIGSI LNFGVSMIFV RDLSAWKIGM DSGTLAAVYS GVVCSGIAYY IQSIVIKQRG PVFTTSFSPM CMVITSFLGA
301: LVLAEKIHLG SIIGAIFIVI GLYSVVWGKS KDVVNPLDEK IVVGQELPIT NSVKQTNGDV LGAPMNGREA SGAQVNGVAT SI
Best Arabidopsis Sequence Match ( AT1G44800.1 )
(BLAST)
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.