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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56779 Canola plasma membrane 98.94 98.94
Bra014682.1-P Field mustard plasma membrane 84.08 85.22
AT3G56620.1 Thale cress plasma membrane 82.49 82.49
Bra003245.1-P Field mustard plasma membrane 81.43 81.87
Bra016963.1-P Field mustard plasma membrane 69.23 67.44
Bra004592.1-P Field mustard plasma membrane 68.97 65.99
Bra000212.1-P Field mustard plasma membrane 68.7 65.9
Bra009296.1-P Field mustard plasma membrane 47.75 45.11
Bra017186.1-P Field mustard plasma membrane 39.52 40.27
Bra012297.1-P Field mustard plasma membrane 38.2 39.67
Bra005033.1-P Field mustard plasma membrane 39.26 39.47
Bra017068.1-P Field mustard plasma membrane 39.26 39.47
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 37.4 38.95
Bra005193.1-P Field mustard plasma membrane 38.73 38.42
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 36.87 37.27
Bra014029.1-P Field mustard plasma membrane 37.14 37.04
Bra008810.1-P Field mustard plasma membrane 35.01 36.97
Bra040619.1-P Field mustard plasma membrane 36.07 35.6
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 35.28 35.56
Bra010143.1-P Field mustard golgi, plasma membrane 32.89 35.23
Bra023428.1-P Field mustard plasma membrane 34.48 34.3
Bra001699.1-P Field mustard plasma membrane 30.24 32.48
Bra021301.1-P Field mustard plasma membrane 29.18 30.56
Bra018748.1-P Field mustard plasma membrane 29.18 30.56
Bra003751.1-P Field mustard plasma membrane 29.71 29.02
Bra008201.1-P Field mustard plasma membrane 29.97 28.97
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 29.44 28.61
Bra012063.1-P Field mustard plasma membrane 26.53 26.74
Bra038272.1-P Field mustard plasma membrane 24.93 25.2
Bra027604.1-P Field mustard plasma membrane 25.46 25.0
Bra027605.1-P Field mustard plasma membrane 24.67 24.28
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 25.2 23.87
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 24.14 22.03
Protein Annotations
EnsemblPlants:Bra007258.1EnsemblPlants:Bra007258.1-PEnsemblPlantsGene:Bra007258GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF9PFAM:PF00892SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002542B97UniProt:M4CSR6MapMan:24.2.1.5:
Description
AT3G56620 (E=1e-152) | integral membrane family protein / nodulin MtN21-related
Coordinates
chrA09:-:28236311..28238060
Molecular Weight (calculated)
41233.7 Da
IEP (calculated)
9.058
GRAVY (calculated)
0.669
Length
377 amino acids
Sequence
(BLAST)
001: MGLKMSESAK PYSAMVCLQF GYVGMNLVTK VVLDRGMSHF VLVAYRNVFA TAALAPFALL SERKGRPKMT FPIFMQIFVL ALLGPVIDQN LYYAGLKLTS
101: PIFAGAVTSI LPALTFIISI IFRMEKVKTR KVRFQAKVVG TLVIVVGAIL MILFKSPLTI FLRSHLIHDA SSLAGEDYLK ATVFLLIASL SWASFFVLQA
201: ATLKTYSSHL SLSTMVCFMG TLQSTALTFV MEPSLSALHV GFDMNLLASA YAGIMTSSIA YYVQGMMMAK QKSPVFVTAF NPLIVIFGSI IGFLVLGQRL
301: YLGGVLGMVI LTMGVCAVLW GKEGDEEENS DEEEVFVEVV KCYKGCGNNS LSMPRIDEEV DVEMQSTRKA KTVVALL
Best Arabidopsis Sequence Match ( AT3G56620.1 )
(BLAST)
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Arabidopsis Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.