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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 99.46 99.46
CDY49560 Canola golgi, plasma membrane, vacuole 99.2 99.2
AT4G08300.1 Thale cress plasma membrane 88.47 88.47
CDY14996 Canola plasma membrane 76.14 74.35
CDY12554 Canola plasma membrane 75.87 74.08
KRH64697 Soybean golgi, nucleus, plasma membrane 62.47 59.14
KRH53223 Soybean golgi, nucleus, plasma membrane 63.0 58.9
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 60.86 58.06
KRH16315 Soybean golgi, nucleus, plastid 59.52 57.36
KRH18766 Soybean golgi, nucleus, plasma membrane 59.25 56.81
CDY00403 Canola plasma membrane 57.64 56.73
PGSC0003DMT400002407 Potato golgi, plasma membrane 54.96 55.71
Solyc11g012930.1.1 Tomato golgi, plasma membrane 54.42 55.01
CDY01310 Canola plasma membrane 57.1 54.9
CDY04680 Canola plasma membrane 57.37 54.04
CDY20446 Canola plasma membrane 46.92 46.67
CDY53594 Canola plasma membrane 46.65 46.4
CDY07016 Canola plasma membrane 46.11 45.74
CDX93255 Canola plasma membrane 45.84 45.48
CDX79735 Canola golgi, plasma membrane, vacuole 34.32 45.23
CDX79734 Canola golgi, plasma membrane, vacuole 43.43 44.75
CDY07788 Canola golgi, plasma membrane, vacuole 43.43 44.75
CDX93378 Canola cytosol, plasma membrane, vacuole 43.97 43.97
CDY18444 Canola plasma membrane 43.7 43.7
CDX74958 Canola plasma membrane 44.24 43.42
CDX91365 Canola plasma membrane 44.24 43.42
CDX99012 Canola plasma membrane 25.74 42.86
CDY29141 Canola plasma membrane 43.97 42.82
CDX75163 Canola plasma membrane 43.7 42.45
CDY09817 Canola plasma membrane 38.87 42.03
CDY22493 Canola plasma membrane 23.06 41.75
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 41.82 41.71
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 41.55 41.44
CDX70003 Canola plasma membrane 43.16 40.35
CDY65991 Canola plasma membrane 39.14 38.62
CDX85633 Canola plasma membrane 38.61 37.99
CDX76001 Canola plasma membrane 37.8 37.9
CDY68855 Canola plasma membrane 38.07 37.87
CDY63536 Canola plasma membrane 33.78 37.84
CDX91104 Canola plasma membrane 38.34 37.73
CDY56779 Canola plasma membrane 37.0 36.6
CDX94896 Canola plasma membrane 36.19 36.49
CDY06954 Canola plasma membrane 37.8 36.43
CDY53669 Canola plasma membrane 38.34 36.29
CDY68060 Canola plasma membrane 37.53 36.18
CDX79964 Canola plasma membrane 38.07 36.04
CDY35431 Canola plasma membrane 37.8 35.88
CDY14752 Canola plasma membrane 37.0 35.66
CDX72122 Canola plasma membrane 35.66 35.47
CDX99013 Canola golgi, plasma membrane, vacuole 14.75 35.26
CDY51934 Canola plasma membrane 26.54 33.56
CDX75960 Canola plasma membrane 26.54 33.56
CDY18510 Canola plasma membrane 31.9 33.06
CDX93689 Canola plasma membrane 31.37 32.5
CDX95542 Canola plasma membrane 26.54 32.46
CDY45218 Canola plasma membrane 32.17 32.09
CDY65383 Canola golgi, plasma membrane, vacuole 21.18 31.23
CDY40602 Canola plasma membrane 24.93 31.1
CDX68127 Canola plasma membrane 30.03 29.02
CDX85897 Canola plasma membrane 30.03 28.87
CDY20378 Canola plasma membrane 29.49 28.5
CDY64209 Canola golgi, plasma membrane, vacuole 29.49 28.35
CDY47518 Canola golgi, plasma membrane, vacuole 29.49 28.35
CDY09279 Canola plasma membrane 29.22 27.39
CDY39037 Canola golgi, plasma membrane, vacuole 22.52 27.18
CDX86054 Canola plasma membrane 27.88 27.08
CDY23125 Canola plasma membrane 27.61 26.82
CDY13057 Canola plasma membrane 27.61 26.82
CDX99139 Canola plasma membrane 27.61 26.82
CDX76488 Canola plasma membrane 28.42 26.63
CDY23124 Canola plasma membrane 27.35 26.63
CDY13056 Canola plasma membrane 27.08 26.37
CDX78925 Canola plasma membrane 26.01 24.74
CDX99393 Canola mitochondrion 27.88 20.88
Protein Annotations
MapMan:24.2.1.5GO:A0A078JBY4UniProt:A0A078JBY4EnsemblPlants:CDY63388ProteinID:CDY63388ProteinID:CDY63388.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00039248001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF12SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF2EAAInterPro:WAT1-related
Description
BnaCnng41950DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBY4]
Coordinates
chrLK034292:+:18267..22641
Molecular Weight (calculated)
40378.5 Da
IEP (calculated)
9.725
GRAVY (calculated)
0.571
Length
373 amino acids
Sequence
(BLAST)
001: MKGGEKQCGK VDKLKPIIAI ISLQFGYAGM YIITMVSFKH GMNHWVLATY RHVVATIVMA PFALILERKI RPKMTWPLFL RILALGILEP LMDQNFYYIG
101: MKATSATYSS AFVNALPAVT FIMAVIFKLE TVNLKKIRSL AKVIGTAITV GGAMVMTLYK GPAIELIKAA HTSIHGGSSS ETTDQHWVTG TLAVMGSIIS
201: WAGFFILQSF TLKKYPAELS LVMWICGMGT ILNTAASLVM VRDLSAWKIG MDSGTLAAVY SGVVCSGMAY YIQSIVIRER GPVFTTSFSP MCMIITAFLG
301: ALVLAEKIHL GSIIGAVFIV FGLYSVVWGK AKDEVISTTE EKIGMQELPI TSIISTDGGG NPCAHNKGVT NST
Best Arabidopsis Sequence Match ( AT4G08300.1 )
(BLAST)
001: MKGGKMDKLK PIIAIISLQF GYAGMYIITM VSFKHGMNHW ILATYRHVVA TIVIAPFALI LERKIRPKMT WPLFLRILAL GFLEPLLDQN LYYIGMKATS
101: ATYSSAFVNA LPAITFIMAV IFRIETVNLK KTRSLAKVIG TAITVGGAMV MTLYKGPAIE LFKTAHSSLH GGSSGTSSET TDQNWVTGTL AVMGSITTWA
201: GFFILQSFTL KKYPAELSLV MWICAMGTVL NTIASLIMVR DVSAWKVGMD SGTLAAVYSG VVCSGMAYYI QSIVIRERGP VFTTSFSPMC MIITAFLGVL
301: VLAEKIHLGS IIGAIFIVFG LYSVVWGKAK DEVISVEEKI GMQELPITNT STKVEGGGIT SEVNEGVTNN TQV
Arabidopsis Description
WAT1-related protein At4g08300 [Source:UniProtKB/Swiss-Prot;Acc:Q501F8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.