Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56779 | Canola | plasma membrane | 92.8 | 92.31 |
| CDX76001 | Canola | plasma membrane | 84.0 | 84.68 |
| CDX94896 | Canola | plasma membrane | 83.47 | 84.59 |
| AT3G56620.1 | Thale cress | plasma membrane | 82.93 | 82.49 |
| CDY68855 | Canola | plasma membrane | 82.4 | 82.4 |
| CDY22493 | Canola | plasma membrane | 38.13 | 69.42 |
| CDY63536 | Canola | plasma membrane | 61.33 | 69.07 |
| CDY14752 | Canola | plasma membrane | 68.8 | 66.67 |
| CDY68060 | Canola | plasma membrane | 68.8 | 66.67 |
| CDY53669 | Canola | plasma membrane | 69.6 | 66.24 |
| CDY06954 | Canola | plasma membrane | 67.73 | 65.63 |
| CDX79964 | Canola | plasma membrane | 68.53 | 65.23 |
| CDY35431 | Canola | plasma membrane | 68.0 | 64.89 |
| CDX99012 | Canola | plasma membrane | 26.93 | 45.09 |
| CDX70003 | Canola | plasma membrane | 47.73 | 44.86 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 40.27 | 40.48 |
| CDY00403 | Canola | plasma membrane | 40.53 | 40.11 |
| CDY20446 | Canola | plasma membrane | 40.0 | 40.0 |
| CDY53594 | Canola | plasma membrane | 39.73 | 39.73 |
| CDY18444 | Canola | plasma membrane | 39.47 | 39.68 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 29.87 | 39.58 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 38.13 | 39.5 |
| CDY09817 | Canola | plasma membrane | 36.27 | 39.42 |
| CDX93255 | Canola | plasma membrane | 39.47 | 39.36 |
| CDY07016 | Canola | plasma membrane | 39.47 | 39.36 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 37.87 | 39.23 |
| CDX91365 | Canola | plasma membrane | 39.47 | 38.95 |
| CDX74958 | Canola | plasma membrane | 39.47 | 38.95 |
| CDY01310 | Canola | plasma membrane | 40.27 | 38.92 |
| CDY04680 | Canola | plasma membrane | 40.27 | 38.13 |
| CDY65991 | Canola | plasma membrane | 37.6 | 37.3 |
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.27 | 36.36 |
| CDX93377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.0 | 36.1 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 35.73 | 35.92 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 35.47 | 35.66 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 14.67 | 35.26 |
| CDY51934 | Canola | plasma membrane | 27.73 | 35.25 |
| CDX75960 | Canola | plasma membrane | 27.73 | 35.25 |
| CDY29141 | Canola | plasma membrane | 35.47 | 34.73 |
| CDX91104 | Canola | plasma membrane | 34.93 | 34.56 |
| CDX85633 | Canola | plasma membrane | 34.93 | 34.56 |
| CDX75163 | Canola | plasma membrane | 35.2 | 34.38 |
| CDY14996 | Canola | plasma membrane | 34.93 | 34.29 |
| CDY12554 | Canola | plasma membrane | 34.67 | 34.03 |
| CDX95542 | Canola | plasma membrane | 26.93 | 33.11 |
| CDY40602 | Canola | plasma membrane | 25.87 | 32.44 |
| CDX93689 | Canola | plasma membrane | 30.93 | 32.22 |
| CDY18510 | Canola | plasma membrane | 30.93 | 32.22 |
| CDX68127 | Canola | plasma membrane | 30.67 | 29.79 |
| CDX85897 | Canola | plasma membrane | 30.67 | 29.64 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 30.4 | 29.38 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 30.4 | 29.38 |
| CDY20378 | Canola | plasma membrane | 29.87 | 29.02 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 23.47 | 28.48 |
| CDY45218 | Canola | plasma membrane | 27.73 | 27.81 |
| CDX86054 | Canola | plasma membrane | 25.87 | 25.26 |
| CDY23125 | Canola | plasma membrane | 25.6 | 25.0 |
| CDX99139 | Canola | plasma membrane | 25.6 | 25.0 |
| CDY23124 | Canola | plasma membrane | 25.33 | 24.8 |
| CDY13057 | Canola | plasma membrane | 25.33 | 24.74 |
| CDY09279 | Canola | plasma membrane | 26.13 | 24.62 |
| CDY13056 | Canola | plasma membrane | 24.8 | 24.28 |
| CDX76488 | Canola | plasma membrane | 25.6 | 24.12 |
| CDY65383 | Canola | golgi, plasma membrane, vacuole | 14.93 | 22.13 |
| CDX78925 | Canola | plasma membrane | 22.67 | 21.68 |
| CDX99393 | Canola | mitochondrion | 24.8 | 18.67 |
Protein Annotations
| EnsemblPlants:CDX72122 | EnsemblPlantsGene:GSBRNA2T00155938001 | GO:A0A078C5E5 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF9 | PFAM:PF00892 | ProteinID:CDX72122 | ProteinID:CDX72122.1 |
| SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EDB0BB | MapMan:24.2.1.5 | : |
Description
BnaC08g27520D
Coordinates
chrLK031795:+:2548094..2549978
Molecular Weight (calculated)
41084.8 Da
IEP (calculated)
9.401
GRAVY (calculated)
0.731
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKMLESAK PYFAMVCLQF GYVGMNLVTK VVLDRGMSHF VLVAYRNVFA TAALAPFALL SERKARPKMT FPIFMQIFVL ALLGPVIDQN LYYAGLKLTS
101: PTFAGAITSI VPALTFIISI TLRMEKVKTR KVRFQAKVVG TLVIVVGAIL VISFKSPLII YLRSHIIHVA SSLAGEDYLK AAVFLLIASL SWAAFFVLQA
201: ATLKTYSSHL SLSTMVCFMG TLQSTALTFV MEPSLLAWNI GFDMNLLASA YAGIMTSSIA YYVQGMMTKQ KSTVFVTAFN PLIVIIGSII GFVILGQRLY
301: LGGVLGMVIL MMGVCAVLWG KEGDEEENSD EEVFVEVVKC CKGCKNNSLS MPRIDEEVDV EMQSTRKAKM VVALL
101: PTFAGAITSI VPALTFIISI TLRMEKVKTR KVRFQAKVVG TLVIVVGAIL VISFKSPLII YLRSHIIHVA SSLAGEDYLK AAVFLLIASL SWAAFFVLQA
201: ATLKTYSSHL SLSTMVCFMG TLQSTALTFV MEPSLLAWNI GFDMNLLASA YAGIMTSSIA YYVQGMMTKQ KSTVFVTAFN PLIVIIGSII GFVILGQRLY
301: LGGVLGMVIL MMGVCAVLWG KEGDEEENSD EEVFVEVVKC CKGCKNNSLS MPRIDEEVDV EMQSTRKAKM VVALL
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Arabidopsis Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.