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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012297.1-P Field mustard plasma membrane 92.35 96.42
CDY01310 Canola plasma membrane 98.68 96.39
CDY04680 Canola plasma membrane 93.67 89.65
AT1G21890.1 Thale cress plasma membrane 89.18 86.89
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 63.06 61.13
CDY49560 Canola golgi, plasma membrane, vacuole 56.99 57.91
CDY63388 Canola golgi, plasma membrane, vacuole 56.73 57.64
Solyc11g012930.1.1 Tomato golgi, plasma membrane 53.3 54.74
CDY14996 Canola plasma membrane 55.15 54.71
CDY12554 Canola plasma membrane 54.88 54.45
PGSC0003DMT400002407 Potato golgi, plasma membrane 52.77 54.35
CDY53594 Canola plasma membrane 47.49 48.0
CDY20446 Canola plasma membrane 47.49 48.0
CDY07016 Canola plasma membrane 47.49 47.87
CDX93255 Canola plasma membrane 47.49 47.87
CDX79735 Canola golgi, plasma membrane, vacuole 35.36 47.35
CDY07788 Canola golgi, plasma membrane, vacuole 44.85 46.96
CDX93378 Canola cytosol, plasma membrane, vacuole 46.17 46.92
CDX99012 Canola plasma membrane 27.7 46.88
CDY22493 Canola plasma membrane 25.33 46.6
CDY18444 Canola plasma membrane 45.65 46.38
CDX79734 Canola golgi, plasma membrane, vacuole 44.06 46.13
CDY29141 Canola plasma membrane 46.44 45.95
CDX75163 Canola plasma membrane 46.44 45.83
CDX91365 Canola plasma membrane 45.91 45.79
CDX74958 Canola plasma membrane 45.91 45.79
CDX70003 Canola plasma membrane 46.44 44.11
CDY68855 Canola plasma membrane 42.74 43.2
CDX76001 Canola plasma membrane 42.22 43.01
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 42.22 42.78
CDX94896 Canola plasma membrane 41.69 42.7
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 41.95 42.51
CDY53669 Canola plasma membrane 44.06 42.39
CDX79964 Canola plasma membrane 44.06 42.39
CDY09817 Canola plasma membrane 38.26 42.03
CDY56779 Canola plasma membrane 41.16 41.38
CDY06954 Canola plasma membrane 42.22 41.34
CDY68060 Canola plasma membrane 41.69 40.83
CDY14752 Canola plasma membrane 41.69 40.83
CDY35431 Canola plasma membrane 42.22 40.71
CDX72122 Canola plasma membrane 40.11 40.53
CDY63536 Canola plasma membrane 34.56 39.34
CDY65991 Canola plasma membrane 38.52 38.62
CDX85633 Canola plasma membrane 38.52 38.52
CDX91104 Canola plasma membrane 38.26 38.26
CDX99013 Canola golgi, plasma membrane, vacuole 14.78 35.9
CDY51934 Canola plasma membrane 27.18 34.92
CDX75960 Canola plasma membrane 27.18 34.92
CDX93689 Canola plasma membrane 31.66 33.33
CDX95542 Canola plasma membrane 26.65 33.11
CDY40602 Canola plasma membrane 26.12 33.11
CDY18510 Canola plasma membrane 31.4 33.06
CDY45218 Canola plasma membrane 31.4 31.82
CDX68127 Canola plasma membrane 31.4 30.83
CDX85897 Canola plasma membrane 31.4 30.67
CDY47518 Canola golgi, plasma membrane, vacuole 30.87 30.15
CDY64209 Canola golgi, plasma membrane, vacuole 30.87 30.15
CDY20378 Canola plasma membrane 30.08 29.53
CDX99139 Canola plasma membrane 29.55 29.17
CDX86054 Canola plasma membrane 29.55 29.17
CDY65383 Canola golgi, plasma membrane, vacuole 19.0 28.46
CDY09279 Canola plasma membrane 29.29 27.89
CDX76488 Canola plasma membrane 29.02 27.64
CDY39037 Canola golgi, plasma membrane, vacuole 22.43 27.51
CDY23124 Canola plasma membrane 27.7 27.42
CDY23125 Canola plasma membrane 27.7 27.34
CDY13057 Canola plasma membrane 27.44 27.08
CDY13056 Canola plasma membrane 26.91 26.63
CDX78925 Canola plasma membrane 26.65 25.77
CDX99393 Canola mitochondrion 29.29 22.29
Protein Annotations
EnsemblPlants:CDY00403EnsemblPlantsGene:GSBRNA2T00110038001GO:A0A078EM20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF12PFAM:PF00892ProteinID:CDY00403ProteinID:CDY00403.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE5275MapMan:24.2.1.5:
Description
BnaC07g14230D
Coordinates
chrLK031918:-:640047..642494
Molecular Weight (calculated)
41382.5 Da
IEP (calculated)
9.834
GRAVY (calculated)
0.508
Length
379 amino acids
Sequence
(BLAST)
001: MESEKMWGGL MNRVKPYLAM ISMQFGYAGM YIITMVSLKH GMNHYILAVY RHAIATVVIA PFALFHERKT RPKMTFRIFL QIALLGFIEP VLDQNLYYVG
101: MTYTSATFAS ATANVLPAIT FVLAIIFRLE SVNFKKVRSI AKVIGTVITV SGALLMTLYK GPIIDFIKFG GPHGGAASAA LDKHWVPGTL MLLGRTFGWA
201: GFFILQSFTL KEYPAELSLT ALICLMGTLE GTAVSLVTVR DLSAWKIGFD SNLFAAAYSG VICSGVAYYV QGVVMRERGP VFVATFNPLC VVITAALGVV
301: VLSESIHLGS VIGTIFIIVG LYTVVWGKGK DKRMTDDDSK ELPVKISVKE VDANRVLAGK LEMKTKEGQE TNKANQAGI
Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.