CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91104	Canola	plasma membrane	98.42	98.42
Bra023428.1-P	Field mustard	plasma membrane	97.36	97.36
CDY09817	Canola	plasma membrane	78.1	85.8
CDY65991	Canola	plasma membrane	82.85	83.07
AT5G13670.1	Thale cress	plasma membrane	82.06	82.49
CDY20446	Canola	plasma membrane	48.28	48.8
CDY53594	Canola	plasma membrane	47.76	48.27
VIT_13s0019g00500.t01	Wine grape	plasma membrane	47.23	48.25
CDY07016	Canola	plasma membrane	47.49	47.87
CDX93255	Canola	plasma membrane	47.23	47.61
CDX79734	Canola	golgi, plasma membrane, vacuole	43.27	45.3
CDY07788	Canola	golgi, plasma membrane, vacuole	43.01	45.03
Solyc06g031710.2.1	Tomato	plasma membrane	42.74	44.51
PGSC0003DMT400076318	Potato	plasma membrane	42.48	43.99
CDX93378	Canola	cytosol, plasma membrane, vacuole	43.27	43.97
CDX79735	Canola	golgi, plasma membrane, vacuole	32.45	43.46
CDY18444	Canola	plasma membrane	42.74	43.43
PGSC0003DMT400071320	Potato	plasma membrane	42.74	42.97
CDX91365	Canola	plasma membrane	43.01	42.89
CDX74958	Canola	plasma membrane	43.01	42.89
Solyc04g011340.2.1	Tomato	plasma membrane	42.48	42.82
CDX93377	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.16	41.71
CDY18443	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.16	41.71
CDY22493	Canola	plasma membrane	21.37	39.32
CDX70003	Canola	plasma membrane	41.16	39.1
CDY63388	Canola	golgi, plasma membrane, vacuole	37.99	38.61
CDX75163	Canola	plasma membrane	39.05	38.54
CDY00403	Canola	plasma membrane	38.52	38.52
CDY29141	Canola	plasma membrane	38.79	38.38
CDY49560	Canola	golgi, plasma membrane, vacuole	37.73	38.34
CDY01310	Canola	plasma membrane	38.79	37.89
CDX99013	Canola	golgi, plasma membrane, vacuole	15.57	37.82
CDX99012	Canola	plasma membrane	22.16	37.5
CDY68855	Canola	plasma membrane	36.68	37.07
CDX95542	Canola	plasma membrane	29.82	37.05
CDY12554	Canola	plasma membrane	37.2	36.91
CDY14996	Canola	plasma membrane	37.2	36.91
CDY04680	Canola	plasma membrane	38.52	36.87
CDX76001	Canola	plasma membrane	36.15	36.83
CDX94896	Canola	plasma membrane	35.88	36.76
CDY06954	Canola	plasma membrane	37.47	36.69
CDY51934	Canola	plasma membrane	28.5	36.61
CDX75960	Canola	plasma membrane	28.5	36.61
CDY53669	Canola	plasma membrane	37.99	36.55
CDX79964	Canola	plasma membrane	37.73	36.29
CDY68060	Canola	plasma membrane	36.94	36.18
CDY14752	Canola	plasma membrane	36.68	35.92
CDY35431	Canola	plasma membrane	37.2	35.88
CDX93689	Canola	plasma membrane	33.77	35.56
CDY40602	Canola	plasma membrane	27.7	35.12
CDY56779	Canola	plasma membrane	34.83	35.01
CDX72122	Canola	plasma membrane	34.56	34.93
CDY18510	Canola	plasma membrane	32.98	34.72
CDY63536	Canola	plasma membrane	30.08	34.23
CDY64209	Canola	golgi, plasma membrane, vacuole	31.93	31.19
CDY47518	Canola	golgi, plasma membrane, vacuole	31.66	30.93
CDX85897	Canola	plasma membrane	31.4	30.67
CDX68127	Canola	plasma membrane	31.13	30.57
CDY45218	Canola	plasma membrane	28.76	29.14
CDY20378	Canola	plasma membrane	29.55	29.02
CDY39037	Canola	golgi, plasma membrane, vacuole	23.22	28.48
CDY65383	Canola	golgi, plasma membrane, vacuole	19.0	28.46
CDY23124	Canola	plasma membrane	25.33	25.07
CDY13056	Canola	plasma membrane	25.33	25.07
CDY23125	Canola	plasma membrane	24.54	24.22
CDY13057	Canola	plasma membrane	24.01	23.7
CDX86054	Canola	plasma membrane	24.01	23.7
CDY09279	Canola	plasma membrane	24.8	23.62
CDX99139	Canola	plasma membrane	23.75	23.44
CDX76488	Canola	plasma membrane	24.54	23.37
CDX78925	Canola	plasma membrane	24.01	23.21
CDX99393	Canola	mitochondrion	25.86	19.68

Protein Annotations

EnsemblPlants:CDX85633	EnsemblPlantsGene:GSBRNA2T00143363001	GO:A0A078DEB0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF141	PFAM:PF00892	ProteinID:CDX85633	ProteinID:CDX85633.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE9538	MapMan:24.2.1.5	:

Description

BnaA02g01800D

Coordinates

chrLK031842:+:950343..952094

Molecular Weight (calculated)

41963.7 Da

IEP (calculated)

10.152

GRAVY (calculated)

0.444

Length

379 amino acids

Sequence
(BLAST)

001: MKFQKARPFI AIVFIQFLYA LMSIVAKLAL NQGMSPHVLV AYRMAVATAL ITPFALILER NTRPRLTFKI LFQISIMSLF EPVVEQNLYY SGMKLTTATF
101: TSALCNALPA ITFIMACIFK LEKVNIKRRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSKSRSYNGQ SHVMNTPKQE DTGKGSIMLV ASCFTWSCYI
201: ILQANILNSY QAELSLTALM CCMGMLEATV MALILERNNM SAWKIHPDMR LLASIYGGLV SGLSYYITGW ASKERGPVFV SAFNPLSMVI VAILSSFIFL
301: EKMYIGRVVG SVVIVIGIYL VLWGKSKEKV GNLLPKAGCA GTVVKLEEQK VLTHDNNQVV HKSDKIMIPK APTKSQESV

Best Arabidopsis Sequence Match ( AT5G13670.1 )
(BLAST)

001: MKFERARPFI AIVFIQCLYA LMSIVAKLAL NKGMSPHVLV AYRMAVASAL ITPFALILER NTRPKLTFKI LLQIAILSLF EPVVEQNLYY SGMKLTTATF
101: TSALCNALPA MTFIMACVFK LEKVTIERRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSNSRGLNGH THAMRIPKQA DIARGSIMLV ASCFSWSCYI
201: ILQAKILAQY KAELSLTALM CIMGMLEATV MGLIWERKNM SVWKINPDVT LLASIYGGLV SGLAYYVIGW ASKERGPVFV SAFNPLSMVL VAILSTFVFL
301: EKVYVGRVIG SVVIVIGIYL VLWGKSKDKG GMLQPNAGCA ETVVKIDQQK VPTPDNNQVV SISYHLMIPK AAARSQE

Arabidopsis Description

WAT1-related protein At5g13670 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.