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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79734 Canola golgi, plasma membrane, vacuole 91.52 71.55
CDY07788 Canola golgi, plasma membrane, vacuole 90.11 70.44
CDX93378 Canola cytosol, plasma membrane, vacuole 86.93 65.95
CDX74958 Canola plasma membrane 86.93 64.74
CDX91365 Canola plasma membrane 86.93 64.74
CDY18444 Canola plasma membrane 85.16 64.61
AT2G37460.1 Thale cress cytosol, plasma membrane, vacuole 86.57 64.47
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 76.33 57.75
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 75.27 56.95
Solyc12g098280.1.1 Tomato extracellular, golgi 47.0 47.16
KRH67559 Soybean plasma membrane 62.19 46.68
Solyc09g010360.2.1 Tomato golgi, plasma membrane, vacuole 60.78 45.87
PGSC0003DMT400022827 Potato golgi, plasma membrane, vacuole 60.42 45.6
KRG95827 Soybean plasma membrane 61.48 45.43
KRH19731 Soybean cytosol 57.6 43.01
CDY22493 Canola plasma membrane 31.1 42.72
KRH32320 Soybean plasma membrane 56.54 42.22
CDX99012 Canola plasma membrane 32.86 41.52
VIT_08s0040g02500.t01 Wine grape plasma membrane, vacuole 58.66 41.29
CDY07016 Canola plasma membrane 51.24 38.56
CDY20446 Canola plasma membrane 50.53 38.13
CDX93255 Canola plasma membrane 50.53 38.03
PGSC0003DMT400095497 Potato plasma membrane 28.98 37.96
CDY53594 Canola plasma membrane 50.18 37.87
CDY00403 Canola plasma membrane 47.35 35.36
CDY09817 Canola plasma membrane 42.76 35.07
CDY63388 Canola golgi, plasma membrane, vacuole 45.23 34.32
CDY49560 Canola golgi, plasma membrane, vacuole 45.23 34.32
CDY01310 Canola plasma membrane 46.64 34.02
CDY04680 Canola plasma membrane 47.35 33.84
CDY63536 Canola plasma membrane 39.58 33.63
CDY65991 Canola plasma membrane 43.82 32.8
CDX91104 Canola plasma membrane 43.46 32.45
CDX85633 Canola plasma membrane 43.46 32.45
CDY29141 Canola plasma membrane 43.82 32.38
CDX75163 Canola plasma membrane 43.46 32.03
CDX94896 Canola plasma membrane 41.7 31.89
CDY68855 Canola plasma membrane 42.05 31.73
CDX76001 Canola plasma membrane 41.7 31.72
CDX70003 Canola plasma membrane 43.82 31.08
CDY06954 Canola plasma membrane 42.4 31.01
CDY68060 Canola plasma membrane 42.4 31.01
CDY14752 Canola plasma membrane 42.05 30.75
CDY53669 Canola plasma membrane 42.76 30.71
CDY14996 Canola plasma membrane 41.34 30.63
CDY12554 Canola plasma membrane 41.34 30.63
CDY56779 Canola plasma membrane 40.64 30.5
CDX79964 Canola plasma membrane 42.4 30.46
CDX72122 Canola plasma membrane 39.58 29.87
CDY35431 Canola plasma membrane 41.34 29.77
CDX75960 Canola plasma membrane 27.56 26.44
CDY51934 Canola plasma membrane 27.56 26.44
CDX95542 Canola plasma membrane 27.92 25.9
CDY18510 Canola plasma membrane 32.86 25.83
CDX93689 Canola plasma membrane 32.86 25.83
CDY40602 Canola plasma membrane 25.09 23.75
CDX85897 Canola plasma membrane 31.45 22.94
CDX68127 Canola plasma membrane 31.1 22.8
CDY20378 Canola plasma membrane 31.1 22.8
CDY47518 Canola golgi, plasma membrane, vacuole 31.1 22.68
CDY64209 Canola golgi, plasma membrane, vacuole 31.1 22.68
CDY39037 Canola golgi, plasma membrane, vacuole 22.61 20.71
CDX99139 Canola plasma membrane 27.92 20.57
CDX86054 Canola plasma membrane 27.56 20.31
CDY13056 Canola plasma membrane 26.5 19.58
CDY23125 Canola plasma membrane 26.5 19.53
CDY23124 Canola plasma membrane 26.15 19.32
CDY13057 Canola plasma membrane 26.15 19.27
CDY09279 Canola plasma membrane 26.86 19.1
CDY45218 Canola plasma membrane 25.09 18.98
CDX78925 Canola plasma membrane 26.15 18.88
CDX76488 Canola plasma membrane 25.44 18.09
CDX99393 Canola mitochondrion 27.56 15.66
CDY65383 Canola golgi, plasma membrane, vacuole 10.95 12.25
CDX99013 Canola golgi, plasma membrane, vacuole 6.01 10.9
Protein Annotations
EnsemblPlants:CDX79735EnsemblPlantsGene:GSBRNA2T00132555001GO:A0A078CSD3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF29PFAM:PF00892ProteinID:CDX79735ProteinID:CDX79735.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF04B1MapMan:24.2.1.5:
Description
BnaC03g20710D
Coordinates
chrLK031818:-:2016651..2018847
Molecular Weight (calculated)
30942.9 Da
IEP (calculated)
9.681
GRAVY (calculated)
0.598
Length
283 amino acids
Sequence
(BLAST)
001: MEEVRKRGCM EKARPVILVV LLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATLVMAP FALYFDKKVR PKMTFMIFFR ITLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF ILAYIFGLER VKLRCIRSAG KVIGTLATVG GAMIMTLVKG PVLDLFWTKG ASAPNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAVTLR TYPAELSLTA WICLMGTIEG TVVALVMEKG NPGAWAIGWD AKLLTVTYSV SVTPVTSYME DSVSPPTRHH TTM
Best Arabidopsis Sequence Match ( AT2G37450.2 )
(BLAST)
001: MACMKKALPF ILMVLLQIGY AGMDILTKDV LNKGMSIYVL SVYRHGVATV VMAPFAFYFD NPVIAQNLFN LGMKYTTATF AIALYNTLPA VTFILALIFR
101: LESVKFQSIR SAAKVVGTVT TVGGIMVMTL VKGPALDLFW TKGPSAQNTV GTDIHSSIKG AVLVTIGCFS YACFMILQAI TLKTYPAELS LATWICLIGT
201: IEGVVVALVM EKGNPSVWAI GWDTKLLTIT YSGIVCSALG YYIGGVVMKT RGPVFVTAFK PLCMIVVAIM SSIIFDEQMY LGRALGATVI CVGLYLVIWG
301: KAKDYEYPST PQIDDDLAQA TTSKQKEQRR TVIESV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W1D2]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.