CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22493	Canola	plasma membrane	45.65	73.79
CDY68855	Canola	plasma membrane	78.68	69.87
AT3G56620.1	Thale cress	plasma membrane	73.27	64.72
CDX94896	Canola	plasma membrane	69.67	62.7
CDX76001	Canola	plasma membrane	69.97	62.63
CDY56779	Canola	plasma membrane	70.27	62.07
CDX72122	Canola	plasma membrane	69.07	61.33
CDY68060	Canola	plasma membrane	64.86	55.81
CDY06954	Canola	plasma membrane	64.56	55.56
CDY14752	Canola	plasma membrane	64.26	55.3
CDY35431	Canola	plasma membrane	63.06	53.44
CDX79964	Canola	plasma membrane	62.46	52.79
CDY53669	Canola	plasma membrane	61.86	52.28
CDX99012	Canola	plasma membrane	31.83	47.32
CDX79735	Canola	golgi, plasma membrane, vacuole	33.63	39.58
CDX70003	Canola	plasma membrane	45.35	37.84
CDY00403	Canola	plasma membrane	39.34	34.56
CDY49560	Canola	golgi, plasma membrane, vacuole	38.14	34.05
CDY63388	Canola	golgi, plasma membrane, vacuole	37.84	33.78
CDY01310	Canola	plasma membrane	39.34	33.76
CDX93255	Canola	plasma membrane	37.84	33.51
CDY07016	Canola	plasma membrane	37.84	33.51
CDY09817	Canola	plasma membrane	34.53	33.33
CDY20446	Canola	plasma membrane	37.54	33.33
CDY04680	Canola	plasma membrane	39.64	33.33
CDX93378	Canola	cytosol, plasma membrane, vacuole	37.24	33.24
CDX79734	Canola	golgi, plasma membrane, vacuole	35.74	32.87
CDY53594	Canola	plasma membrane	36.94	32.8
CDY18444	Canola	plasma membrane	36.64	32.71
CDY07788	Canola	golgi, plasma membrane, vacuole	35.44	32.6
CDY12554	Canola	plasma membrane	37.24	32.46
CDY14996	Canola	plasma membrane	37.24	32.46
CDX74958	Canola	plasma membrane	35.74	31.32
CDX91365	Canola	plasma membrane	35.74	31.32
CDX93377	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.83	31.02
CDY18443	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.83	31.02
CDY65991	Canola	plasma membrane	35.14	30.95
CDX85633	Canola	plasma membrane	34.23	30.08
CDX91104	Canola	plasma membrane	34.23	30.08
CDY29141	Canola	plasma membrane	33.93	29.5
CDX75163	Canola	plasma membrane	33.63	29.17
CDY51934	Canola	plasma membrane	24.02	27.12
CDX75960	Canola	plasma membrane	24.02	27.12
CDX95542	Canola	plasma membrane	23.72	25.9
CDY18510	Canola	plasma membrane	27.33	25.28
CDX93689	Canola	plasma membrane	27.03	25.0
CDY40602	Canola	plasma membrane	21.92	24.41
CDX68127	Canola	plasma membrane	27.33	23.58
CDY45218	Canola	plasma membrane	26.43	23.53
CDX85897	Canola	plasma membrane	27.33	23.45
CDY64209	Canola	golgi, plasma membrane, vacuole	27.03	23.2
CDY47518	Canola	golgi, plasma membrane, vacuole	27.03	23.2
CDY20378	Canola	plasma membrane	26.73	23.06
CDX86054	Canola	plasma membrane	25.53	22.14
CDY39037	Canola	golgi, plasma membrane, vacuole	20.42	22.01
CDX99139	Canola	plasma membrane	25.23	21.88
CDY09279	Canola	plasma membrane	24.02	20.1
CDY23124	Canola	plasma membrane	22.52	19.58
CDY23125	Canola	plasma membrane	22.52	19.53
CDY13057	Canola	plasma membrane	22.52	19.53
CDX76488	Canola	plasma membrane	23.12	19.35
CDY13056	Canola	plasma membrane	22.22	19.32
CDX78925	Canola	plasma membrane	21.62	18.37
CDY65383	Canola	golgi, plasma membrane, vacuole	12.61	16.6
CDX99393	Canola	mitochondrion	23.42	15.66
CDX99013	Canola	golgi, plasma membrane, vacuole	6.91	14.74

Protein Annotations

MapMan:24.2.1.5	GO:A0A078JBM1	UniProt:A0A078JBM1	EnsemblPlants:CDY63536	ProteinID:CDY63536	ProteinID:CDY63536.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00039389001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF9	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE230C	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaCnng42250DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBM1]

Coordinates

chrLK034316:-:80..1650

Molecular Weight (calculated)

36921.9 Da

IEP (calculated)

9.422

GRAVY (calculated)

0.403

Length

333 amino acids

Sequence
(BLAST)

001: MVLRMSESAK PYFAMICLQF GYAGMNLVTK VVLDRGMSHF VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL GLLGPMIDQN LYYAGLKLTS
101: PTFSGAVTNI MPALTFIISI ICRMEKVDMR KVRFQAKVVG TLVIVVGAML MILIKSPFIN LLRSHLIGDA SLSVGEDYLK ATVFLLMASF SWASFFVLQA
201: ATLKRYSSHG SLSTIVCFMG TLQSTALTFM MDPNLYAWNI GFDMNLLASV YAGIMSSSIA LQENSGILTD IPTENEILGI SRGISEEIPR KHKVSSEYTD
301: GIPREYQSVG IFRGNSEEKC VPRKKPMNSE EIL

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.