Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51934 Canola plasma membrane 98.98 98.98
CDX95542 Canola plasma membrane 93.9 90.82
Bra001699.1-P Field mustard plasma membrane 98.98 83.19
CDY40602 Canola plasma membrane 82.71 81.61
CDY18510 Canola plasma membrane 94.92 77.78
CDX93689 Canola plasma membrane 87.46 71.67
AT3G18200.2 Thale cress plasma membrane 92.54 71.28
KRH48595 Soybean endoplasmic reticulum, plasma membrane 72.2 59.33
KRH39121 Soybean plasma membrane 71.86 59.05
VIT_17s0000g03050.t01 Wine grape plasma membrane 71.19 57.69
PGSC0003DMT400014719 Potato plasma membrane 70.17 57.66
Solyc03g118900.1.1 Tomato plasma membrane 69.49 57.1
CDY39037 Canola golgi, plasma membrane, vacuole 54.92 52.43
Os02t0331400-00 Rice plasma membrane 58.31 51.81
GSMUA_Achr10P... Banana plasma membrane 62.37 50.83
GSMUA_Achr6P09500_001 Banana golgi, plasma membrane 60.68 49.58
TraesCS3A01G019600.1 Wheat plasma membrane 61.36 49.05
TraesCS3B01G026700.1 Wheat plasma membrane 61.02 48.78
Os01t0117900-02 Rice plasma membrane 61.36 48.4
Zm00001d040089_P001 Maize extracellular, golgi, plasma membrane 60.34 48.37
EES02603 Sorghum plasma membrane 61.36 48.27
TraesCS3D01G027300.1 Wheat plasma membrane 61.02 48.26
CDY64209 Canola golgi, plasma membrane, vacuole 59.66 45.36
CDX85897 Canola plasma membrane 59.66 45.36
CDY47518 Canola golgi, plasma membrane, vacuole 58.98 44.85
CDX68127 Canola plasma membrane 58.64 44.82
CDY20378 Canola plasma membrane 58.31 44.56
HORVU3Hr1G002710.4 Barley plasma membrane 61.02 44.55
Zm00001d036123_P002 Maize plasma membrane 52.54 43.3
KXG19264 Sorghum plasma membrane 52.54 43.06
CDY45218 Canola plasma membrane 44.75 35.29
CDY09817 Canola plasma membrane 37.63 32.17
CDX79734 Canola golgi, plasma membrane, vacuole 37.97 30.94
CDX86054 Canola plasma membrane 39.32 30.21
CDY07788 Canola golgi, plasma membrane, vacuole 36.95 30.11
CDX99139 Canola plasma membrane 38.98 29.95
CDY09279 Canola plasma membrane 40.0 29.65
CDY65991 Canola plasma membrane 37.97 29.63
CDX76488 Canola plasma membrane 39.32 29.15
CDX99012 Canola plasma membrane 22.03 29.02
CDX91104 Canola plasma membrane 36.95 28.76
CDX85633 Canola plasma membrane 36.61 28.5
CDX76001 Canola plasma membrane 35.93 28.49
CDY22493 Canola plasma membrane 19.66 28.16
CDX94896 Canola plasma membrane 35.25 28.11
CDY07016 Canola plasma membrane 35.59 27.93
CDY06954 Canola plasma membrane 36.61 27.91
CDX93378 Canola cytosol, plasma membrane, vacuole 35.25 27.88
CDX75163 Canola plasma membrane 36.27 27.86
CDX70003 Canola plasma membrane 37.63 27.82
CDX72122 Canola plasma membrane 35.25 27.73
CDY68855 Canola plasma membrane 35.25 27.73
CDY53594 Canola plasma membrane 35.25 27.73
CDY20446 Canola plasma membrane 35.25 27.73
CDY29141 Canola plasma membrane 35.93 27.68
CDY53669 Canola plasma membrane 36.95 27.66
CDX79964 Canola plasma membrane 36.95 27.66
CDX93255 Canola plasma membrane 35.25 27.66
CDX91365 Canola plasma membrane 35.59 27.63
CDX74958 Canola plasma membrane 35.59 27.63
CDY18444 Canola plasma membrane 34.92 27.61
CDX79735 Canola golgi, plasma membrane, vacuole 26.44 27.56
CDX78925 Canola plasma membrane 36.61 27.55
CDY56779 Canola plasma membrane 34.92 27.32
CDY35431 Canola plasma membrane 36.27 27.23
CDY00403 Canola plasma membrane 34.92 27.18
CDY68060 Canola plasma membrane 35.59 27.13
CDY14752 Canola plasma membrane 35.59 27.13
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 34.24 27.01
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 34.24 27.01
CDY65383 Canola golgi, plasma membrane, vacuole 23.05 26.88
CDY23125 Canola plasma membrane 34.92 26.82
CDY49560 Canola golgi, plasma membrane, vacuole 33.9 26.81
CDY13057 Canola plasma membrane 34.58 26.56
CDY01310 Canola plasma membrane 34.92 26.55
CDY63388 Canola golgi, plasma membrane, vacuole 33.56 26.54
CDY13056 Canola plasma membrane 34.24 26.37
CDY23124 Canola plasma membrane 33.9 26.11
CDY04680 Canola plasma membrane 34.92 26.01
CDY14996 Canola plasma membrane 32.54 25.13
CDX99013 Canola golgi, plasma membrane, vacuole 13.22 25.0
CDY12554 Canola plasma membrane 31.86 24.61
CDY63536 Canola plasma membrane 27.12 24.02
CDX99393 Canola mitochondrion 37.97 22.49
Protein Annotations
EnsemblPlants:CDX75960EnsemblPlantsGene:GSBRNA2T00123992001GO:A0A078CGH5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF62PFAM:PF00892ProteinID:CDX75960ProteinID:CDX75960.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE0FE2MapMan:24.2.1.5::
Description
BnaC03g40430D
Coordinates
chrLK031805:-:2187399..2189013
Molecular Weight (calculated)
32786.1 Da
IEP (calculated)
8.807
GRAVY (calculated)
0.778
Length
295 amino acids
Sequence
(BLAST)
001: MAKAVVSEKM KLVVALITLQ FCFAGFHIVS RVALNIGVSK VVYPVYRNLL ALLLIGPFAY FLEKKERPPL TISLLAQFFF LALIGITANQ GFYLLGLYYA
101: TPTFASAMQN SVPAITFIMA CALRLENIDL VRKHGVAKVL GTLVSIAPVL KKYPAKLTLT SFTCFFGLVQ FLVIALFVET DLNNWIIVSW EELFTILYAG
201: IIASGLVVYL QTWCIYKGGP VFVAVFQPLQ TLLVAAMAFL VLGDQLYSGS VLGAVFIMLG LYLVLWGKNQ ERRQMVEETS PQDPESLNKH LLEEH
Best Arabidopsis Sequence Match ( AT3G18200.1 )
(BLAST)
001: MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK
101: QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI
201: VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
Arabidopsis Description
WAT1-related protein At3g18200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV20]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.