Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G39510.1 | CDX78905 | AT4G19030.1 | 21798944 |
| AT2G39510.1 | CDX98596 | AT4G19030.1 | 21798944 |
| AT2G39510.1 | CDX99411 | AT4G19030.1 | 21798944 |
| AT2G39510.1 | CDY01565 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07016 | Canola | plasma membrane | 97.87 | 97.87 |
| Bra017068.1-P | Field mustard | plasma membrane | 97.34 | 97.6 |
| CDY53594 | Canola | plasma membrane | 89.89 | 90.13 |
| CDY20446 | Canola | plasma membrane | 89.89 | 90.13 |
| AT2G39510.1 | Thale cress | plasma membrane | 87.77 | 88.24 |
| Solyc06g031710.2.1 | Tomato | plasma membrane | 53.19 | 54.95 |
| PGSC0003DMT400076318 | Potato | plasma membrane | 53.46 | 54.92 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 51.33 | 53.31 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 51.06 | 53.04 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 51.33 | 51.74 |
| CDY18444 | Canola | plasma membrane | 51.33 | 51.74 |
| CDX91365 | Canola | plasma membrane | 51.33 | 50.79 |
| CDX74958 | Canola | plasma membrane | 51.33 | 50.79 |
| PGSC0003DMT400071320 | Potato | plasma membrane | 50.8 | 50.66 |
| Solyc04g011340.2.1 | Tomato | plasma membrane | 50.53 | 50.53 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 38.03 | 50.53 |
| CDY09817 | Canola | plasma membrane | 45.48 | 49.57 |
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.2 | 49.47 |
| CDX93377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.94 | 49.2 |
| CDY00403 | Canola | plasma membrane | 47.87 | 47.49 |
| CDX85633 | Canola | plasma membrane | 47.61 | 47.23 |
| CDX91104 | Canola | plasma membrane | 47.61 | 47.23 |
| CDY14996 | Canola | plasma membrane | 47.61 | 46.86 |
| CDY12554 | Canola | plasma membrane | 47.34 | 46.6 |
| CDY65991 | Canola | plasma membrane | 46.54 | 46.3 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 45.74 | 46.11 |
| CDY29141 | Canola | plasma membrane | 46.81 | 45.95 |
| CDY01310 | Canola | plasma membrane | 47.34 | 45.88 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 45.48 | 45.84 |
| CDX75163 | Canola | plasma membrane | 46.81 | 45.83 |
| CDY04680 | Canola | plasma membrane | 47.34 | 44.95 |
| CDX99012 | Canola | plasma membrane | 26.33 | 44.2 |
| CDX70003 | Canola | plasma membrane | 45.21 | 42.61 |
| CDY22493 | Canola | plasma membrane | 23.14 | 42.23 |
| CDY68855 | Canola | plasma membrane | 41.49 | 41.6 |
| CDX76001 | Canola | plasma membrane | 40.96 | 41.4 |
| CDX94896 | Canola | plasma membrane | 40.69 | 41.35 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 16.49 | 39.74 |
| CDY56779 | Canola | plasma membrane | 39.63 | 39.52 |
| CDX72122 | Canola | plasma membrane | 39.36 | 39.47 |
| CDY53669 | Canola | plasma membrane | 40.96 | 39.09 |
| CDY06954 | Canola | plasma membrane | 39.89 | 38.76 |
| CDX79964 | Canola | plasma membrane | 40.43 | 38.58 |
| CDY68060 | Canola | plasma membrane | 39.63 | 38.5 |
| CDY14752 | Canola | plasma membrane | 39.1 | 37.98 |
| CDY35431 | Canola | plasma membrane | 39.63 | 37.91 |
| CDY63536 | Canola | plasma membrane | 33.51 | 37.84 |
| CDY51934 | Canola | plasma membrane | 27.93 | 35.59 |
| CDX75960 | Canola | plasma membrane | 27.66 | 35.25 |
| CDX95542 | Canola | plasma membrane | 28.46 | 35.08 |
| CDX93689 | Canola | plasma membrane | 32.18 | 33.61 |
| CDY18510 | Canola | plasma membrane | 31.91 | 33.33 |
| CDY40602 | Canola | plasma membrane | 26.06 | 32.78 |
| CDX85897 | Canola | plasma membrane | 33.78 | 32.73 |
| CDX68127 | Canola | plasma membrane | 33.51 | 32.64 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 32.98 | 31.96 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 32.98 | 31.96 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 25.53 | 31.07 |
| CDY20378 | Canola | plasma membrane | 31.38 | 30.57 |
| CDY45218 | Canola | plasma membrane | 29.52 | 29.68 |
| CDX99139 | Canola | plasma membrane | 27.66 | 27.08 |
| CDX86054 | Canola | plasma membrane | 27.66 | 27.08 |
| CDY23124 | Canola | plasma membrane | 26.86 | 26.37 |
| CDY13056 | Canola | plasma membrane | 26.6 | 26.11 |
| CDY65383 | Canola | golgi, plasma membrane, vacuole | 17.55 | 26.09 |
| CDY09279 | Canola | plasma membrane | 27.13 | 25.63 |
| CDY23125 | Canola | plasma membrane | 26.06 | 25.52 |
| CDX76488 | Canola | plasma membrane | 26.6 | 25.13 |
| CDY13057 | Canola | plasma membrane | 25.53 | 25.0 |
| CDX78925 | Canola | plasma membrane | 25.27 | 24.23 |
| CDX99393 | Canola | mitochondrion | 26.06 | 19.68 |
Protein Annotations
| EnsemblPlants:CDX93255 | EnsemblPlantsGene:GSBRNA2T00155213001 | GO:A0A078DV96 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF18 | PFAM:PF00892 | ProteinID:CDX93255 | ProteinID:CDX93255.1 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE1CC6 | MapMan:24.2.1.5 | : | : |
Description
BnaC04g46410D
Coordinates
chrLK031875:+:613293..615123
Molecular Weight (calculated)
40933.8 Da
IEP (calculated)
9.384
GRAVY (calculated)
0.552
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKTWKPFL IVISLQFGYA GLSIIAKFAL DRGMSPHVLA AYRHIVATIF IAPFAFFLDS RKVRPKMTLP IFFKIALLGL LEPTIDQNLY YTGMKYTSAT
101: FTAAMTNVLP AFAFLMAWIF RLEKVNIRKV HSQAKILGTV VTVGGAMLMT VVKGPLVPLP WANPNDNHQD SSNPGVTPDL TKGALLIAIG CICWAGFVNL
201: QAITIKSYPV ELSLTAYICL MGSIESTIVA LFIERGNPSA WAIQLDSKLL AAVYGGVICS GVGYYVQGVI MKTRGPVFVT AFNPLSMVIV AILGSIILAE
301: VMYLGRILGA IVIVLGLYSV LWGKSKDEPS NSFSDMDIEF PRSTPQVVTF SLKSNTETDT MDASVVTSRH NTNESV
101: FTAAMTNVLP AFAFLMAWIF RLEKVNIRKV HSQAKILGTV VTVGGAMLMT VVKGPLVPLP WANPNDNHQD SSNPGVTPDL TKGALLIAIG CICWAGFVNL
201: QAITIKSYPV ELSLTAYICL MGSIESTIVA LFIERGNPSA WAIQLDSKLL AAVYGGVICS GVGYYVQGVI MKTRGPVFVT AFNPLSMVIV AILGSIILAE
301: VMYLGRILGA IVIVLGLYSV LWGKSKDEPS NSFSDMDIEF PRSTPQVVTF SLKSNTETDT MDASVVTSRH NTNESV
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Arabidopsis Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.