Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017068.1-P | Field mustard | plasma membrane | 89.3 | 89.07 |
| CDY07016 | Canola | plasma membrane | 89.04 | 88.56 |
| CDY53594 | Canola | plasma membrane | 88.5 | 88.27 |
| CDY20446 | Canola | plasma membrane | 88.5 | 88.27 |
| Bra005033.1-P | Field mustard | plasma membrane | 88.5 | 88.27 |
| CDX93255 | Canola | plasma membrane | 88.24 | 87.77 |
| PGSC0003DMT400076318 | Potato | plasma membrane | 54.01 | 55.19 |
| Solyc06g031710.2.1 | Tomato | plasma membrane | 53.21 | 54.67 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 52.94 | 52.11 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 46.79 | 52.08 |
| PGSC0003DMT400071320 | Potato | plasma membrane | 52.41 | 51.99 |
| Solyc04g011340.2.1 | Tomato | plasma membrane | 51.87 | 51.6 |
| AT1G44800.1 | Thale cress | plasma membrane | 48.13 | 48.65 |
| AT4G08300.1 | Thale cress | plasma membrane | 47.59 | 47.72 |
| AT5G13670.1 | Thale cress | plasma membrane | 45.45 | 45.09 |
| AT1G21890.1 | Thale cress | plasma membrane | 46.52 | 44.73 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 46.52 | 43.28 |
| AT4G08290.1 | Thale cress | plasma membrane | 44.38 | 43.23 |
| AT3G56620.1 | Thale cress | plasma membrane | 40.37 | 40.05 |
| AT2G40900.1 | Thale cress | plasma membrane | 39.3 | 37.31 |
| AT4G24980.1 | Thale cress | plasma membrane | 25.67 | 35.56 |
| AT1G75500.1 | Thale cress | plasma membrane | 34.76 | 33.42 |
| AT3G18200.2 | Thale cress | plasma membrane | 33.69 | 32.9 |
| AT3G53210.1 | Thale cress | plasma membrane | 32.35 | 32.79 |
| AT3G45870.1 | Thale cress | plasma membrane | 28.61 | 27.79 |
| AT5G45370.2 | Thale cress | plasma membrane | 28.07 | 27.56 |
| AT4G19185.1 | Thale cress | plasma membrane | 28.34 | 26.63 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:818536 | ProteinID:AAC27842.1 | ProteinID:AEC09688.1 | EMBL:AK227747 | ArrayExpress:AT2G39510 |
| EnsemblPlantsGene:AT2G39510 | RefSeq:AT2G39510 | TAIR:AT2G39510 | RefSeq:AT2G39510-TAIR-G | EnsemblPlants:AT2G39510.1 | TAIR:AT2G39510.1 |
| EMBL:BT006205 | InterPro:EamA_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006868 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009791 | GO:GO:0015186 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0044746 |
| GO:GO:0048316 | GO:GO:0055085 | GO:GO:0080144 | GO:GO:0098712 | RefSeq:NP_181483.1 | UniProt:O80638 |
| PFAM:PF00892 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF18 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00000A2AF2 | InterPro:WAT1-related | : | : |
Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
Coordinates
chr2:-:16491143..16493343
Molecular Weight (calculated)
40676.7 Da
IEP (calculated)
9.727
GRAVY (calculated)
0.579
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.