CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14752	Canola	plasma membrane	99.22	99.22
CDY06954	Canola	plasma membrane	96.12	96.12
CDY22493	Canola	plasma membrane	45.48	85.44
CDY53669	Canola	plasma membrane	86.56	85.03
CDX79964	Canola	plasma membrane	85.53	84.01
CDY35431	Canola	plasma membrane	85.27	83.97
AT2G40900.1	Thale cress	plasma membrane	85.27	83.76
CDY68855	Canola	plasma membrane	67.7	69.87
CDY56779	Canola	plasma membrane	67.96	69.76
CDX94896	Canola	plasma membrane	66.41	69.46
CDX72122	Canola	plasma membrane	66.67	68.8
CDX76001	Canola	plasma membrane	65.89	68.55
CDY63536	Canola	plasma membrane	55.81	64.86
CDX99012	Canola	plasma membrane	29.72	51.34
CDX70003	Canola	plasma membrane	50.39	48.87
CDX93378	Canola	cytosol, plasma membrane, vacuole	41.34	42.9
CDY18444	Canola	plasma membrane	41.09	42.63
CDX79734	Canola	golgi, plasma membrane, vacuole	39.79	42.54
CDX79735	Canola	golgi, plasma membrane, vacuole	31.01	42.4
CDY07788	Canola	golgi, plasma membrane, vacuole	39.28	41.99
CDX91365	Canola	plasma membrane	41.09	41.84
CDX74958	Canola	plasma membrane	41.09	41.84
CDY00403	Canola	plasma membrane	40.83	41.69
CDY01310	Canola	plasma membrane	40.83	40.72
CDY09817	Canola	plasma membrane	36.18	40.58
CDY04680	Canola	plasma membrane	41.34	40.4
CDX93255	Canola	plasma membrane	38.5	39.63
CDY07016	Canola	plasma membrane	38.5	39.63
CDX93377	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.24	39.57
CDY18443	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.24	39.57
CDY20446	Canola	plasma membrane	38.24	39.47
CDY53594	Canola	plasma membrane	37.73	38.93
CDY65991	Canola	plasma membrane	37.21	38.1
CDX99013	Canola	golgi, plasma membrane, vacuole	15.25	37.82
CDY49560	Canola	golgi, plasma membrane, vacuole	36.43	37.8
CDY63388	Canola	golgi, plasma membrane, vacuole	36.18	37.53
CDX85633	Canola	plasma membrane	36.18	36.94
CDX91104	Canola	plasma membrane	36.18	36.94
CDY12554	Canola	plasma membrane	35.4	35.86
CDX75960	Canola	plasma membrane	27.13	35.59
CDY51934	Canola	plasma membrane	27.13	35.59
CDY14996	Canola	plasma membrane	34.88	35.34
CDY29141	Canola	plasma membrane	34.11	34.46
CDY40602	Canola	plasma membrane	26.61	34.45
CDX95542	Canola	plasma membrane	27.13	34.43
CDX75163	Canola	plasma membrane	33.85	34.11
CDX93689	Canola	plasma membrane	31.01	33.33
CDY18510	Canola	plasma membrane	30.23	32.5
CDY39037	Canola	golgi, plasma membrane, vacuole	23.77	29.77
CDY45218	Canola	plasma membrane	28.68	29.68
CDY47518	Canola	golgi, plasma membrane, vacuole	29.72	29.64
CDY64209	Canola	golgi, plasma membrane, vacuole	29.72	29.64
CDX68127	Canola	plasma membrane	29.46	29.53
CDX85897	Canola	plasma membrane	29.46	29.38
CDY20378	Canola	plasma membrane	29.2	29.27
CDY65383	Canola	golgi, plasma membrane, vacuole	17.05	26.09
CDX86054	Canola	plasma membrane	25.32	25.52
CDY09279	Canola	plasma membrane	26.1	25.38
CDX99139	Canola	plasma membrane	25.06	25.26
CDY23125	Canola	plasma membrane	24.81	25.0
CDY23124	Canola	plasma membrane	24.55	24.8
CDY13056	Canola	plasma membrane	24.55	24.8
CDY13057	Canola	plasma membrane	24.55	24.74
CDX76488	Canola	plasma membrane	25.32	24.62
CDX78925	Canola	plasma membrane	23.0	22.7
CDX99393	Canola	mitochondrion	24.55	19.08

Protein Annotations

MapMan:24.2.1.5	GO:A0A078JNJ4	UniProt:A0A078JNJ4	EnsemblPlants:CDY68060	ProteinID:CDY68060	ProteinID:CDY68060.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00069175001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF9	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE4A9D	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaCnng57410DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNJ4]

Coordinates

chrLK036810:+:2473..4881

Molecular Weight (calculated)

42328.4 Da

IEP (calculated)

8.624

GRAVY (calculated)

0.568

Length

387 amino acids

Sequence
(BLAST)

001: MGLRMSESAK PYFAMICLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFAFL SERKVRSKMT FSIFMHIFVL ALLGPVIDQN LYYIGLKLTS
101: PTFSTAVSNI VPAITFILDT LFRMERVEMR KVRCQVKVVG TLVTVVGSIL MILHKGPFIS SFRSQLTTAS SPLAGDYLKA TIFLLIASLS WASFFILQAS
201: TLKKYSAHLS LSTMVCFMGT LQSLALTFVM EHNPSALNIG FDMNLLASVY AGIMSSSIAY YIQGLMMQRK GPVFVTAFNP LVVVIVSIMS FFVLGQGTYL
301: GGGIGVVVLT VGVYTVLWAK HLDDDGEAIC REDNTTLEAV KCCSGNNGLS IMPKIDEAHE DVETGKIKSE EKESSAVVVG FGCGFWF

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.