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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004592.1-P Field mustard plasma membrane 98.48 98.48
CDY53669 Canola plasma membrane 96.7 96.7
AT2G40900.1 Thale cress plasma membrane 87.56 87.56
CDY22493 Canola plasma membrane 45.43 86.89
CDY35431 Canola plasma membrane 86.04 86.26
CDY14752 Canola plasma membrane 84.26 85.79
CDY68060 Canola plasma membrane 84.01 85.53
CDY06954 Canola plasma membrane 84.01 85.53
CDX94896 Canola plasma membrane 66.24 70.54
CDX76001 Canola plasma membrane 66.24 70.16
CDY68855 Canola plasma membrane 65.99 69.33
CDY56779 Canola plasma membrane 65.74 68.7
CDX72122 Canola plasma membrane 65.23 68.53
CDY63536 Canola plasma membrane 52.79 62.46
CDX99012 Canola plasma membrane 29.19 51.34
CDX70003 Canola plasma membrane 50.76 50.13
CDY00403 Canola plasma membrane 42.39 44.06
CDX93378 Canola cytosol, plasma membrane, vacuole 40.86 43.16
CDX79734 Canola golgi, plasma membrane, vacuole 39.34 42.82
CDY01310 Canola plasma membrane 42.13 42.78
CDY18444 Canola plasma membrane 40.36 42.63
CDY09817 Canola plasma membrane 37.31 42.61
CDY04680 Canola plasma membrane 42.64 42.42
CDX79735 Canola golgi, plasma membrane, vacuole 30.46 42.4
CDX74958 Canola plasma membrane 40.86 42.37
CDX91365 Canola plasma membrane 40.86 42.37
CDY07788 Canola golgi, plasma membrane, vacuole 38.83 42.27
CDX99013 Canola golgi, plasma membrane, vacuole 16.5 41.67
CDY20446 Canola plasma membrane 38.83 40.8
CDY07016 Canola plasma membrane 38.58 40.43
CDX93255 Canola plasma membrane 38.58 40.43
CDY53594 Canola plasma membrane 38.32 40.27
CDY65991 Canola plasma membrane 38.07 39.68
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 37.31 39.3
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 37.31 39.3
CDY49560 Canola golgi, plasma membrane, vacuole 36.29 38.34
CDY63388 Canola golgi, plasma membrane, vacuole 36.04 38.07
CDX91104 Canola plasma membrane 36.29 37.73
CDX85633 Canola plasma membrane 36.29 37.73
CDY51934 Canola plasma membrane 27.66 36.95
CDX75960 Canola plasma membrane 27.66 36.95
CDY29141 Canola plasma membrane 35.03 36.03
CDY12554 Canola plasma membrane 34.77 35.86
CDX95542 Canola plasma membrane 27.66 35.74
CDX75163 Canola plasma membrane 34.77 35.68
CDY14996 Canola plasma membrane 34.52 35.6
CDY40602 Canola plasma membrane 26.65 35.12
CDY18510 Canola plasma membrane 30.96 33.89
CDX93689 Canola plasma membrane 30.96 33.89
CDX68127 Canola plasma membrane 31.47 32.12
CDX85897 Canola plasma membrane 31.47 31.96
CDY39037 Canola golgi, plasma membrane, vacuole 24.87 31.72
CDY47518 Canola golgi, plasma membrane, vacuole 31.22 31.7
CDY64209 Canola golgi, plasma membrane, vacuole 31.22 31.7
CDY45218 Canola plasma membrane 29.95 31.55
CDY20378 Canola plasma membrane 30.71 31.35
CDY65383 Canola golgi, plasma membrane, vacuole 18.02 28.06
CDX86054 Canola plasma membrane 25.63 26.3
CDX99139 Canola plasma membrane 25.38 26.04
CDY23125 Canola plasma membrane 25.13 25.78
CDY09279 Canola plasma membrane 25.89 25.63
CDY23124 Canola plasma membrane 24.87 25.59
CDY13056 Canola plasma membrane 24.87 25.59
CDY13057 Canola plasma membrane 24.87 25.52
CDX76488 Canola plasma membrane 25.63 25.38
CDX78925 Canola plasma membrane 23.1 23.21
CDX99393 Canola mitochondrion 24.87 19.68
Protein Annotations
EnsemblPlants:CDX79964EnsemblPlantsGene:GSBRNA2T00132826001GO:A0A078CVA9GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF9PFAM:PF00892ProteinID:CDX79964ProteinID:CDX79964.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEB5DFMapMan:24.2.1.5:
Description
BnaA05g01920D
Coordinates
chrLK031819:+:1079635..1082063
Molecular Weight (calculated)
43311.7 Da
IEP (calculated)
8.367
GRAVY (calculated)
0.606
Length
394 amino acids
Sequence
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLLTK TVLDRGMSHY VLVAYRNAFA TAAIAPFAFL SERKVRSKMT FSIFMHIFVL ALLGPVIDQN LYYIGLRLTS
101: PTFSSAVSNI VPAITFILAT LFRMEKVEMK KVRCQVKVVG TLVTVAGSIL MILYKGPFIN FFRSHLTTTA TASSPLAGDY FKAAVFLLLA SLSWASFFIL
201: QAWTLKKYAA HLSLSTMVCF MGTLQSLALA FVMEHNPSAL NISFDMNLLA SAYAGIMSSS IAYYVQGLMM QRKGPVFVTA FNPLVVVIVS IMSFFVLGQG
301: IYLGGVIGLV VLMVGVYAVL WGKHVDDDDK ETRCEDNILV TVKCCSGNSD LSMMPTIDEA DEDVETGKVQ AVEKETSLVV VVFCRENVDN VSRC
Best Arabidopsis Sequence Match ( AT2G40900.1 )
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRSKMT FPIFMRIFLL ALLGPVIDQN LYYIGLKLTS
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
Arabidopsis Description
WAT1-related protein At2g40900 [Source:UniProtKB/Swiss-Prot;Acc:F4IJ08]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.