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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016963.1-P Field mustard plasma membrane 98.97 98.97
CDY14752 Canola plasma membrane 96.9 96.9
CDY68060 Canola plasma membrane 96.12 96.12
CDY22493 Canola plasma membrane 45.48 85.44
CDY53669 Canola plasma membrane 86.56 85.03
CDY35431 Canola plasma membrane 85.53 84.22
CDX79964 Canola plasma membrane 85.53 84.01
AT2G40900.1 Thale cress plasma membrane 84.75 83.25
CDY68855 Canola plasma membrane 66.67 68.8
CDY56779 Canola plasma membrane 66.93 68.7
CDX94896 Canola plasma membrane 65.63 68.65
CDX76001 Canola plasma membrane 65.12 67.74
CDX72122 Canola plasma membrane 65.63 67.73
CDY63536 Canola plasma membrane 55.56 64.56
CDX99012 Canola plasma membrane 30.75 53.12
CDX70003 Canola plasma membrane 51.42 49.87
CDX93378 Canola cytosol, plasma membrane, vacuole 41.34 42.9
CDY18444 Canola plasma membrane 41.09 42.63
CDX79734 Canola golgi, plasma membrane, vacuole 39.79 42.54
CDX79735 Canola golgi, plasma membrane, vacuole 31.01 42.4
CDX74958 Canola plasma membrane 41.6 42.37
CDX91365 Canola plasma membrane 41.6 42.37
CDY00403 Canola plasma membrane 41.34 42.22
CDY07788 Canola golgi, plasma membrane, vacuole 39.28 41.99
CDY09817 Canola plasma membrane 36.95 41.45
CDY01310 Canola plasma membrane 41.34 41.24
CDY04680 Canola plasma membrane 41.86 40.91
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 38.76 40.11
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 38.76 40.11
CDY20446 Canola plasma membrane 38.76 40.0
CDX93255 Canola plasma membrane 38.76 39.89
CDY07016 Canola plasma membrane 38.76 39.89
CDY53594 Canola plasma membrane 38.24 39.47
CDY65991 Canola plasma membrane 37.73 38.62
CDY49560 Canola golgi, plasma membrane, vacuole 36.69 38.07
CDX99013 Canola golgi, plasma membrane, vacuole 15.25 37.82
CDY63388 Canola golgi, plasma membrane, vacuole 36.43 37.8
CDX85633 Canola plasma membrane 36.69 37.47
CDX91104 Canola plasma membrane 36.69 37.47
CDY51934 Canola plasma membrane 27.91 36.61
CDX75960 Canola plasma membrane 27.91 36.61
CDY12554 Canola plasma membrane 35.66 36.13
CDY14996 Canola plasma membrane 35.14 35.6
CDX95542 Canola plasma membrane 27.91 35.41
CDY40602 Canola plasma membrane 27.13 35.12
CDY29141 Canola plasma membrane 34.63 34.99
CDX75163 Canola plasma membrane 34.37 34.64
CDX93689 Canola plasma membrane 31.52 33.89
CDY18510 Canola plasma membrane 31.27 33.61
CDY47518 Canola golgi, plasma membrane, vacuole 30.49 30.41
CDY64209 Canola golgi, plasma membrane, vacuole 30.49 30.41
CDX68127 Canola plasma membrane 30.23 30.31
CDX85897 Canola plasma membrane 30.23 30.15
CDY45218 Canola plasma membrane 28.94 29.95
CDY39037 Canola golgi, plasma membrane, vacuole 23.77 29.77
CDY20378 Canola plasma membrane 29.2 29.27
CDY65383 Canola golgi, plasma membrane, vacuole 17.57 26.88
CDY23124 Canola plasma membrane 25.32 25.59
CDY13056 Canola plasma membrane 25.32 25.59
CDY23125 Canola plasma membrane 25.06 25.26
CDX86054 Canola plasma membrane 25.06 25.26
CDY09279 Canola plasma membrane 25.84 25.13
CDY13057 Canola plasma membrane 24.81 25.0
CDX99139 Canola plasma membrane 24.81 25.0
CDX76488 Canola plasma membrane 25.06 24.37
CDX78925 Canola plasma membrane 23.0 22.7
CDX99393 Canola mitochondrion 24.55 19.08
Protein Annotations
EnsemblPlants:CDY06954EnsemblPlantsGene:GSBRNA2T00123258001GO:A0A078F237GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF9PFAM:PF00892ProteinID:CDY06954ProteinID:CDY06954.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEA09CMapMan:24.2.1.5:
Description
BnaA04g23610D
Coordinates
chrLK031974:+:364752..367188
Molecular Weight (calculated)
42238.5 Da
IEP (calculated)
8.783
GRAVY (calculated)
0.600
Length
387 amino acids
Sequence
(BLAST)
001: MGLRISESAK PYFAMICLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFAFL SERKVRSKMT FSIFMHIFVL ALLGPVIDQN LYYIGLKLTS
101: PTFSTAVSNI VPAITFILAT LFRMEKVDMR KVRCQVKVVG TLVTVVGSML MILYKGPFIS SFRSQLTTAS SPLAGDYLKA TIFLLIASLS WASFFILQAS
201: TLKKYSAHLS LSTMVCFMGT LQSLALTFVM EHNPSPLNIG FDMNLLASAY AGIMSSSIAY YIQGLMMQRK GPVFVTAFNP LVVVIVSIMS FFVLGQGTYL
301: GGGIGVVVLT VGVYTVLWAK HVDDDGEAIC REDNTTLEAV KCCSGNNGLS IMPKIDEAHE DIETGKIKAE EKESSAVVLV IGCGFWL
Best Arabidopsis Sequence Match ( AT2G40900.1 )
(BLAST)
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRSKMT FPIFMRIFLL ALLGPVIDQN LYYIGLKLTS
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
Arabidopsis Description
WAT1-related protein At2g40900 [Source:UniProtKB/Swiss-Prot;Acc:F4IJ08]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.