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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85633 Canola plasma membrane 98.42 98.42
Bra023428.1-P Field mustard plasma membrane 97.1 97.1
CDY09817 Canola plasma membrane 78.36 86.09
CDY65991 Canola plasma membrane 83.11 83.33
AT5G13670.1 Thale cress plasma membrane 82.06 82.49
CDY20446 Canola plasma membrane 48.28 48.8
CDY53594 Canola plasma membrane 47.76 48.27
VIT_13s0019g00500.t01 Wine grape plasma membrane 47.23 48.25
CDY07016 Canola plasma membrane 47.49 47.87
CDX93255 Canola plasma membrane 47.23 47.61
CDX79734 Canola golgi, plasma membrane, vacuole 43.27 45.3
CDY07788 Canola golgi, plasma membrane, vacuole 43.01 45.03
Solyc06g031710.2.1 Tomato plasma membrane 43.01 44.78
PGSC0003DMT400076318 Potato plasma membrane 42.48 43.99
CDX93378 Canola cytosol, plasma membrane, vacuole 43.27 43.97
CDX79735 Canola golgi, plasma membrane, vacuole 32.45 43.46
CDY18444 Canola plasma membrane 42.74 43.43
PGSC0003DMT400071320 Potato plasma membrane 42.74 42.97
CDX91365 Canola plasma membrane 43.01 42.89
CDX74958 Canola plasma membrane 43.01 42.89
Solyc04g011340.2.1 Tomato plasma membrane 42.48 42.82
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 41.69 42.25
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 41.69 42.25
CDY22493 Canola plasma membrane 21.37 39.32
CDX70003 Canola plasma membrane 41.16 39.1
CDX75163 Canola plasma membrane 39.05 38.54
CDY29141 Canola plasma membrane 38.79 38.38
CDY63388 Canola golgi, plasma membrane, vacuole 37.73 38.34
CDY00403 Canola plasma membrane 38.26 38.26
CDY49560 Canola golgi, plasma membrane, vacuole 37.47 38.07
CDX99013 Canola golgi, plasma membrane, vacuole 15.57 37.82
CDY01310 Canola plasma membrane 38.52 37.63
CDX99012 Canola plasma membrane 22.16 37.5
CDY12554 Canola plasma membrane 37.47 37.17
CDY14996 Canola plasma membrane 37.47 37.17
CDY68855 Canola plasma membrane 36.68 37.07
CDX95542 Canola plasma membrane 29.82 37.05
CDX75960 Canola plasma membrane 28.76 36.95
CDY51934 Canola plasma membrane 28.76 36.95
CDY04680 Canola plasma membrane 38.52 36.87
CDX76001 Canola plasma membrane 36.15 36.83
CDX94896 Canola plasma membrane 35.88 36.76
CDY06954 Canola plasma membrane 37.47 36.69
CDY53669 Canola plasma membrane 37.99 36.55
CDX79964 Canola plasma membrane 37.73 36.29
CDY68060 Canola plasma membrane 36.94 36.18
CDY14752 Canola plasma membrane 36.68 35.92
CDY35431 Canola plasma membrane 37.2 35.88
CDX93689 Canola plasma membrane 33.77 35.56
CDY40602 Canola plasma membrane 27.7 35.12
CDY56779 Canola plasma membrane 34.83 35.01
CDX72122 Canola plasma membrane 34.56 34.93
CDY18510 Canola plasma membrane 32.98 34.72
CDY63536 Canola plasma membrane 30.08 34.23
CDY64209 Canola golgi, plasma membrane, vacuole 32.19 31.44
CDY47518 Canola golgi, plasma membrane, vacuole 31.93 31.19
CDX85897 Canola plasma membrane 31.66 30.93
CDX68127 Canola plasma membrane 31.4 30.83
CDY45218 Canola plasma membrane 29.02 29.41
CDY20378 Canola plasma membrane 29.82 29.27
CDY39037 Canola golgi, plasma membrane, vacuole 23.48 28.8
CDY65383 Canola golgi, plasma membrane, vacuole 19.0 28.46
CDY23124 Canola plasma membrane 25.33 25.07
CDY13056 Canola plasma membrane 25.33 25.07
CDY23125 Canola plasma membrane 24.54 24.22
CDY13057 Canola plasma membrane 24.01 23.7
CDY09279 Canola plasma membrane 24.8 23.62
CDX86054 Canola plasma membrane 23.75 23.44
CDX76488 Canola plasma membrane 24.54 23.37
CDX99139 Canola plasma membrane 23.48 23.18
CDX78925 Canola plasma membrane 23.75 22.96
CDX99393 Canola mitochondrion 25.59 19.48
Protein Annotations
EnsemblPlants:CDX91104EnsemblPlantsGene:GSBRNA2T00151886001GO:A0A078DRJ2GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF141PFAM:PF00892ProteinID:CDX91104ProteinID:CDX91104.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEFF8CMapMan:24.2.1.5::
Description
BnaC02g04930D
Coordinates
chrLK031865:+:792372..794069
Molecular Weight (calculated)
41920.5 Da
IEP (calculated)
10.024
GRAVY (calculated)
0.428
Length
379 amino acids
Sequence
(BLAST)
001: MKFQKARPFI AIVFIQFLYA LMSIVAKLAL NEGMSPHVLV AYRMAVASAL ITPFALVLER NSRPRLTFKI LFQISILSLF EPVVEQNLYY SGMKLTTATF
101: TSALCNALPA ITFIMACIFK LEKVNIKRRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSKSRSYNGQ SHVMNTPKQE DTGKGSIMLV ASCFTWSCYI
201: ILQANILNSY QAELSLTALM CCMGMLEATV MALILERNNM SAWKIHPDMR LLASIYGGLV SGLSYYITGW ASKERGPVFV SAFNPLSMVI VAILSSFIFL
301: EKMYIGRVDG SVVIVIGIYL VLWGKSKEKV GNLLPKAGCA GTVVKLEEQK VLTHDNNQVV HKSDKIMIPK APTKSQESV
Best Arabidopsis Sequence Match ( AT5G13670.1 )
(BLAST)
001: MKFERARPFI AIVFIQCLYA LMSIVAKLAL NKGMSPHVLV AYRMAVASAL ITPFALILER NTRPKLTFKI LLQIAILSLF EPVVEQNLYY SGMKLTTATF
101: TSALCNALPA MTFIMACVFK LEKVTIERRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSNSRGLNGH THAMRIPKQA DIARGSIMLV ASCFSWSCYI
201: ILQAKILAQY KAELSLTALM CIMGMLEATV MGLIWERKNM SVWKINPDVT LLASIYGGLV SGLAYYVIGW ASKERGPVFV SAFNPLSMVL VAILSTFVFL
301: EKVYVGRVIG SVVIVIGIYL VLWGKSKDKG GMLQPNAGCA ETVVKIDQQK VPTPDNNQVV SISYHLMIPK AAARSQE
Arabidopsis Description
WAT1-related protein At5g13670 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.