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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009296.1-P Field mustard plasma membrane 98.5 98.5
CDX99013 Canola golgi, plasma membrane, vacuole 36.34 92.95
CDX99012 Canola plasma membrane 51.63 91.96
AT5G07050.1 Thale cress golgi, plasma membrane, vacuole 89.72 89.05
VIT_13s0084g00090.t01 Wine grape golgi, plasma membrane, plastid 67.92 67.25
Solyc10g078270.1.1 Tomato golgi, plasma membrane, plastid 63.66 66.32
KRH56218 Soybean plasma membrane 65.41 65.91
PGSC0003DMT400018488 Potato golgi, plasma membrane, plastid 62.91 65.71
GSMUA_Achr9P17350_001 Banana golgi, plasma membrane 58.65 65.55
KRH20615 Soybean plasma membrane 66.92 65.28
KRH62737 Soybean plasma membrane 64.91 65.08
KRH13279 Soybean plasma membrane 66.17 64.55
GSMUA_Achr4P00260_001 Banana plasma membrane 60.65 63.35
GSMUA_Achr3P09230_001 Banana plasma membrane 61.4 63.31
GSMUA_Achr6P08440_001 Banana plasma membrane 59.15 62.93
GSMUA_Achr10P... Banana plasma membrane 59.4 62.2
EES19520 Sorghum peroxisome 60.9 60.9
PGSC0003DMT400072217 Potato plasma membrane 58.15 60.26
TraesCS1B01G321500.1 Wheat plasma membrane 58.65 60.15
HORVU1Hr1G068120.1 Barley plasma membrane 58.15 59.64
TraesCS1A01G310300.1 Wheat plasma membrane 58.15 59.64
TraesCS1D01G309800.1 Wheat plasma membrane 58.15 59.64
Zm00001d010287_P002 Maize golgi, plasma membrane, vacuole 60.9 59.41
HORVU0Hr1G023720.1 Barley plasma membrane 57.89 59.38
Solyc10g080990.1.1 Tomato golgi, plasma membrane, plastid 58.4 59.29
TraesCS3A01G331900.1 Wheat golgi, plasma membrane, vacuole 56.64 59.16
Solyc10g080980.1.1 Tomato golgi, plasma membrane, vacuole 56.39 58.75
TraesCS3B01G362000.1 Wheat golgi, plasma membrane, vacuole 56.89 58.66
TraesCS1B01G267300.1 Wheat plasma membrane 59.15 58.42
TraesCS3D01G325400.1 Wheat golgi, plasma membrane, vacuole 56.64 58.4
TraesCS1A01G256700.1 Wheat peroxisome 58.9 58.31
OQU78229 Sorghum plasma membrane 57.64 58.23
TraesCS1D01G256100.1 Wheat golgi, peroxisome, plasma membrane 58.9 57.88
Zm00001d038554_P001 Maize plasma membrane 56.89 57.61
EES03768 Sorghum plasma membrane 57.89 56.62
Os01t0803300-01 Rice golgi, plasma membrane 46.62 56.19
Os05t0493800-01 Rice golgi, plasma membrane 56.64 55.26
Zm00001d043171_P001 Maize plasma membrane 57.14 55.21
CDY22493 Canola plasma membrane 27.82 53.88
GSMUA_Achr7P21250_001 Banana plastid 43.86 53.19
Zm00001d010655_P001 Maize plasma membrane 56.89 52.79
CDY06954 Canola plasma membrane 49.87 51.42
CDX79964 Canola plasma membrane 50.13 50.76
CDY14752 Canola plasma membrane 48.87 50.39
CDY68060 Canola plasma membrane 48.87 50.39
CDY35431 Canola plasma membrane 49.62 50.38
CDY53669 Canola plasma membrane 49.62 50.25
Os05t0409500-00 Rice mitochondrion 60.15 49.28
GSMUA_Achr6P16060_001 Banana plasma membrane 40.35 49.24
CDY68855 Canola plasma membrane 45.61 48.53
HORVU1Hr1G063340.4 Barley peroxisome 44.11 48.48
CDY56779 Canola plasma membrane 45.11 47.75
CDX72122 Canola plasma membrane 44.86 47.73
CDX76001 Canola plasma membrane 44.36 47.58
CDX94896 Canola plasma membrane 43.36 46.76
CDY00403 Canola plasma membrane 44.11 46.44
CDX93378 Canola cytosol, plasma membrane, vacuole 43.11 46.11
CDY18444 Canola plasma membrane 43.11 46.11
CDX74958 Canola plasma membrane 43.86 46.05
CDX91365 Canola plasma membrane 43.86 46.05
HORVU3Hr1G078710.1 Barley golgi, plasma membrane 43.11 45.62
CDX79734 Canola golgi, plasma membrane, vacuole 41.35 45.58
CDY07788 Canola golgi, plasma membrane, vacuole 41.35 45.58
CDY07016 Canola plasma membrane 42.86 45.48
CDY63536 Canola plasma membrane 37.84 45.35
HORVU5Hr1G044210.1 Barley golgi 42.86 45.24
CDY09817 Canola plasma membrane 39.1 45.22
CDX93255 Canola plasma membrane 42.61 45.21
CDY20446 Canola plasma membrane 42.36 45.07
CDY01310 Canola plasma membrane 43.61 44.85
CDY53594 Canola plasma membrane 41.85 44.53
CDY04680 Canola plasma membrane 43.86 44.19
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 41.1 43.85
CDX79735 Canola golgi, plasma membrane, vacuole 31.08 43.82
CDY12554 Canola plasma membrane 41.6 43.46
CDY14996 Canola plasma membrane 41.6 43.46
CDY49560 Canola golgi, plasma membrane, vacuole 40.6 43.43
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 40.6 43.32
CDY63388 Canola golgi, plasma membrane, vacuole 40.35 43.16
CDY65991 Canola plasma membrane 39.85 42.06
CDX85633 Canola plasma membrane 39.1 41.16
CDX91104 Canola plasma membrane 39.1 41.16
CDY29141 Canola plasma membrane 37.09 38.64
CDX75163 Canola plasma membrane 36.59 38.02
CDX75960 Canola plasma membrane 27.82 37.63
CDY51934 Canola plasma membrane 27.82 37.63
CDX95542 Canola plasma membrane 27.32 35.74
CDX93689 Canola plasma membrane 32.08 35.56
CDY40602 Canola plasma membrane 26.57 35.45
CDY47518 Canola golgi, plasma membrane, vacuole 34.34 35.31
CDY64209 Canola golgi, plasma membrane, vacuole 34.09 35.05
CDY39037 Canola golgi, plasma membrane, vacuole 27.07 34.95
CDY18510 Canola plasma membrane 31.33 34.72
CDX68127 Canola plasma membrane 33.58 34.72
CDX85897 Canola plasma membrane 33.58 34.54
CDY20378 Canola plasma membrane 33.08 34.2
CDY45218 Canola plasma membrane 30.08 32.09
CDY65383 Canola golgi, plasma membrane, vacuole 18.05 28.46
CDX86054 Canola plasma membrane 26.32 27.34
CDX99139 Canola plasma membrane 26.32 27.34
CDY23125 Canola plasma membrane 26.32 27.34
CDY13057 Canola plasma membrane 26.07 27.08
CDY23124 Canola plasma membrane 25.56 26.63
CDY13056 Canola plasma membrane 25.31 26.37
CDY09279 Canola plasma membrane 25.81 25.88
CDX76488 Canola plasma membrane 25.56 25.63
CDX78925 Canola plasma membrane 23.06 23.47
CDX99393 Canola mitochondrion 25.31 20.28
Protein Annotations
EnsemblPlants:CDX70003EnsemblPlantsGene:GSBRNA2T00136094001GO:A0A078C4R7GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF19PFAM:PF00892ProteinID:CDX70003ProteinID:CDX70003.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEB37AMapMan:24.2.1.5:
Description
BnaA10g23520D
Coordinates
chrLK031790:-:2657491..2659646
Molecular Weight (calculated)
44216.0 Da
IEP (calculated)
9.035
GRAVY (calculated)
0.470
Length
399 amino acids
Sequence
(BLAST)
001: MSMEKLGCCE SFLKSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFTI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEVLDVKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHLQHAN DTTPSSNSND NKDFLKGSIL
201: LIFATLAWAS LFVLQAKILK TYSKHQLTLT TLVCFIGTLQ AVAVTFVMEH NPSAWRIGWD MNLLAAAYSG IVASSIAYYV QGIVMKKRGP VFATAFSPLM
301: MVIVAIMGSF VLAEKIFLGG VIGAVLIVIG LYAVLWGKQK ENEVTHCEML EPTKNIDKVT EDVEANNGTE MKYSDSMLST IVISTPATET TLKKTSQEP
Best Arabidopsis Sequence Match ( AT5G07050.1 )
(BLAST)
001: MSMEEISSCE SFLTSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFSI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
Arabidopsis Description
WAT1-related protein At5g07050 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL41]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.