Factsheet for TraesCS1A01G256700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G256100.1	Wheat	golgi, peroxisome, plasma membrane	99.26	98.52
TraesCS1B01G267300.1	Wheat	plasma membrane	98.01	97.77
EES19520	Sorghum	peroxisome	81.39	82.21
Zm00001d010287_P002	Maize	golgi, plasma membrane, vacuole	81.39	80.2
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	65.51	73.95
GSMUA_Achr3P09230_001	Banana	plasma membrane	70.97	73.9
GSMUA_Achr6P08440_001	Banana	plasma membrane	67.49	72.53
HORVU1Hr1G063340.4	Barley	peroxisome	64.02	71.07
GSMUA_Achr10P...	Banana	plasma membrane	66.5	70.34
Os05t0409500-00	Rice	mitochondrion	84.12	69.61
TraesCS3A01G331900.1	Wheat	golgi, plasma membrane, vacuole	65.01	68.59
VIT_13s0084g00090.t01	Wine grape	golgi, plasma membrane, plastid	66.0	66.0
Solyc10g078270.1.1	Tomato	golgi, plasma membrane, plastid	62.03	65.27
TraesCS1A01G310300.1	Wheat	plasma membrane	62.78	65.04
PGSC0003DMT400018488	Potato	golgi, plasma membrane, plastid	61.54	64.92
KRH62737	Soybean	plasma membrane	61.54	62.31
Solyc10g080990.1.1	Tomato	golgi, plasma membrane, plastid	60.55	62.09
PGSC0003DMT400072217	Potato	plasma membrane	59.31	62.08
KRH20615	Soybean	plasma membrane	61.79	60.88
KRH13279	Soybean	plasma membrane	61.79	60.88
Solyc10g080980.1.1	Tomato	golgi, plasma membrane, vacuole	57.82	60.84
KRH56218	Soybean	plasma membrane	59.31	60.35
CDX99012	Canola	plasma membrane	33.25	59.82
Bra009296.1-P	Field mustard	plasma membrane	58.31	58.9
CDX70003	Canola	plasma membrane	58.31	58.9
AT5G07050.1	Thale cress	golgi, plasma membrane, vacuole	57.07	57.21
GSMUA_Achr6P16060_001	Banana	plasma membrane	44.17	54.43
CDX99013	Canola	golgi, plasma membrane, vacuole	20.1	51.92
TraesCS6A01G330100.1	Wheat	plasma membrane	44.66	46.39
TraesCS6A01G329600.1	Wheat	plasma membrane	43.18	44.96
TraesCS6A01G329900.1	Wheat	plasma membrane	42.93	44.94
TraesCS6A01G329700.1	Wheat	plasma membrane	42.93	44.94
TraesCS6A01G329800.1	Wheat	plasma membrane	43.18	44.27
TraesCS7A01G490000.1	Wheat	plasma membrane	40.2	42.3
TraesCS7A01G169100.1	Wheat	plasma membrane	40.45	42.01
TraesCS6A01G330000.1	Wheat	extracellular, golgi, plastid, vacuole	16.13	40.62
TraesCS3A01G007100.1	Wheat	golgi, plasma membrane, vacuole	35.24	37.08
TraesCS4A01G415600.1	Wheat	plasma membrane	33.75	36.46
TraesCS3A01G019600.1	Wheat	plasma membrane	32.01	34.96
TraesCS7A01G281700.1	Wheat	plasma membrane	25.81	33.44
TraesCS7A01G409900.1	Wheat	plasma membrane	25.56	25.81
TraesCS6A01G271500.1	Wheat	plasma membrane	27.05	25.0

Protein Annotations

EnsemblPlants:TraesCS1A01G256700.1	EnsemblPlantsGene:TraesCS1A01G256700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF9	PFAM:PF00892	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.5

Description

No Description!

Coordinates

chr1A:+:449189350..449190846

Molecular Weight (calculated)

43795.5 Da

IEP (calculated)

8.291

GRAVY (calculated)

0.472

Length

403 amino acids

Sequence
(BLAST)

001: MAMQQGGGEG ETLMQRCKPY VAMISLQFGY AGMNVITKVS LNHGMSHYVL VVYRHAFATL SIAPFALFLE RGKARPRMTP LVLLNIFLLA LMGPVIDQNF
101: YYAGLKYTSP TFSCAMSNML PAMTFVMAVI FRMEKVDLKK PRCMAKVAGT LVTVAGAMLM TLYKGRAVEM IWSRHAHLPG PHQDAAAAAK DWFKGSIFLI
201: IATLAWASLF ILQGPTLTRY NAPLTLTTLI CFVGTLQAIV VTLAMEHTTD VWKIGFDMNL LAAAYAGIVT SSIAYYVQGL VIQSRGPVFA SAFSPLMMIV
301: VAIMGSFILA ENIYLGGIIG SVLIVAGLYS VLWGKHKEDV EKKEIEATEI PVAIKGVEGN GRIMDMVELD EVELEKAQAN GKAVTISVPA AAGEAGMQRD
401: DEN

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.