Factsheet for TraesCS6A01G330100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G309000.1	Wheat	extracellular, golgi, plasma membrane	92.78	96.51
TraesCS6B01G360900.1	Wheat	plasma membrane	96.39	96.39
TraesCS6A01G330000.1	Wheat	extracellular, golgi, plastid, vacuole	35.82	86.88
TraesCS6A01G329600.1	Wheat	plasma membrane	84.28	84.5
TraesCS6A01G329800.1	Wheat	plasma membrane	84.02	82.95
TraesCS6A01G329900.1	Wheat	plasma membrane	81.7	82.34
TraesCS6A01G329700.1	Wheat	plasma membrane	79.9	80.52
Zm00001d018195_P001	Maize	plasma membrane	80.41	79.19
EES07591	Sorghum	golgi, plasma membrane	77.06	77.66
Os02t0768300-01	Rice	golgi, plasma membrane	73.71	74.48
TraesCS7A01G169100.1	Wheat	plasma membrane	64.69	64.69
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	55.41	57.64
TraesCS7A01G490000.1	Wheat	plasma membrane	52.84	53.52
TraesCS3A01G331900.1	Wheat	golgi, plasma membrane, vacuole	47.68	48.43
TraesCS1A01G310300.1	Wheat	plasma membrane	46.91	46.79
TraesCS1A01G256700.1	Wheat	peroxisome	46.39	44.66
TraesCS4A01G415600.1	Wheat	plasma membrane	32.22	33.51
TraesCS3A01G019600.1	Wheat	plasma membrane	30.93	32.52
TraesCS3A01G007100.1	Wheat	golgi, plasma membrane, vacuole	31.96	32.38
TraesCS7A01G281700.1	Wheat	plasma membrane	24.23	30.23
TraesCS7A01G409900.1	Wheat	plasma membrane	24.48	23.81
TraesCS6A01G271500.1	Wheat	plasma membrane	25.26	22.48

Protein Annotations

EnsemblPlants:TraesCS6A01G330100.1	EnsemblPlantsGene:TraesCS6A01G330100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:562918870..562921351

Molecular Weight (calculated)

41123.3 Da

IEP (calculated)

9.556

GRAVY (calculated)

0.677

Length

388 amino acids

Sequence
(BLAST)

001: MGMGWKVLSD VKPYLAMVLL QVGFAGMYII AVASLKAGMS HFVLVVYRNL VATAVMAPFA LYFERCKGLR PKMTITIFLK IMGLAFLEPV IDQNLYFMGA
101: KLTSAGFATA LVNILPAVTF VLALLLRMEK VRLRSLHSQA KIAGTVLTVA GAVLMVLYHG PIVQFPWTKG QHHATASGQG VGSAADARDW LNGTIMVIIA
201: CVAWACFFIL QSNTLKSYPA ELSLTVLICG MGSLMSGGIA LVAERANTQA WVIGFDMRLF TAVYAGIVCS GVAYYVQGIV SSQRGPVFVT AFNPLCMIIT
301: AVMGSIILKE EINLGSVIGA AIIVGGLYFL IWGKSKDEIS KAGGSSKGAG ELPLTSVTNG HGSGKQELGN GNGGHVFVVE TPAANGHY

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.